Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh8Q7TSK3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh8Q7TSK3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.75■□□□□ 0.91
Pcdh8Q7TSK3 Gm22238-201ENSMUST00000175222 88 ntBASIC20.75■□□□□ 0.91
Pcdh8Q7TSK3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh8Q7TSK3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh8Q7TSK3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh8Q7TSK3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh8Q7TSK3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh8Q7TSK3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh8Q7TSK3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.74■□□□□ 0.91
Pcdh8Q7TSK3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh8Q7TSK3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh8Q7TSK3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh8Q7TSK3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.73■□□□□ 0.91
Pcdh8Q7TSK3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh8Q7TSK3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.73■□□□□ 0.91
Pcdh8Q7TSK3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.73■□□□□ 0.91
Pcdh8Q7TSK3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh8Q7TSK3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Pcdh8Q7TSK3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh8Q7TSK3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh8Q7TSK3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Pcdh8Q7TSK3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh8Q7TSK3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Pcdh8Q7TSK3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh8Q7TSK3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh8Q7TSK3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh8Q7TSK3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh8Q7TSK3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh8Q7TSK3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Pcdh8Q7TSK3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Pcdh8Q7TSK3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh8Q7TSK3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh8Q7TSK3 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.7■□□□□ 0.9
Pcdh8Q7TSK3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh8Q7TSK3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Pcdh8Q7TSK3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh8Q7TSK3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh8Q7TSK3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh8Q7TSK3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh8Q7TSK3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.7■□□□□ 0.9
Pcdh8Q7TSK3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh8Q7TSK3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh8Q7TSK3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.69■□□□□ 0.9
Pcdh8Q7TSK3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Pcdh8Q7TSK3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh8Q7TSK3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh8Q7TSK3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh8Q7TSK3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh8Q7TSK3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh8Q7TSK3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh8Q7TSK3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh8Q7TSK3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.68■□□□□ 0.9
Pcdh8Q7TSK3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh8Q7TSK3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh8Q7TSK3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcdh8Q7TSK3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcdh8Q7TSK3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh8Q7TSK3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh8Q7TSK3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh8Q7TSK3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh8Q7TSK3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh8Q7TSK3 Gm13241-201ENSMUST00000094493 780 ntBASIC20.67■□□□□ 0.9
Pcdh8Q7TSK3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh8Q7TSK3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Pcdh8Q7TSK3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh8Q7TSK3 Gm9847-201ENSMUST00000052528 599 ntBASIC20.66■□□□□ 0.9
Pcdh8Q7TSK3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh8Q7TSK3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh8Q7TSK3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh8Q7TSK3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh8Q7TSK3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh8Q7TSK3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh8Q7TSK3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh8Q7TSK3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdh8Q7TSK3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdh8Q7TSK3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh8Q7TSK3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Pcdh8Q7TSK3 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.64■□□□□ 0.89
Pcdh8Q7TSK3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.64■□□□□ 0.89
Pcdh8Q7TSK3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh8Q7TSK3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Pcdh8Q7TSK3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh8Q7TSK3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh8Q7TSK3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh8Q7TSK3 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.63■□□□□ 0.89
Pcdh8Q7TSK3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.63■□□□□ 0.89
Pcdh8Q7TSK3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh8Q7TSK3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Pcdh8Q7TSK3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.63■□□□□ 0.89
Pcdh8Q7TSK3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh8Q7TSK3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh8Q7TSK3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh8Q7TSK3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh8Q7TSK3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcdh8Q7TSK3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh8Q7TSK3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh8Q7TSK3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pcdh8Q7TSK3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms