Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Lsm8Q6ZWM4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Lsm8Q6ZWM4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lsm8Q6ZWM4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Lsm8Q6ZWM4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Lsm8Q6ZWM4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.18■■□□□ 1.14
Lsm8Q6ZWM4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Lsm8Q6ZWM4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lsm8Q6ZWM4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lsm8Q6ZWM4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Lsm8Q6ZWM4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.18■■□□□ 1.14
Lsm8Q6ZWM4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Lsm8Q6ZWM4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Lsm8Q6ZWM4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.17■■□□□ 1.14
Lsm8Q6ZWM4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lsm8Q6ZWM4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Lsm8Q6ZWM4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lsm8Q6ZWM4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lsm8Q6ZWM4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Lsm8Q6ZWM4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lsm8Q6ZWM4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lsm8Q6ZWM4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lsm8Q6ZWM4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lsm8Q6ZWM4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.16■■□□□ 1.14
Lsm8Q6ZWM4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Lsm8Q6ZWM4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lsm8Q6ZWM4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lsm8Q6ZWM4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Lsm8Q6ZWM4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lsm8Q6ZWM4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.15■■□□□ 1.14
Lsm8Q6ZWM4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lsm8Q6ZWM4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lsm8Q6ZWM4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lsm8Q6ZWM4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.14■■□□□ 1.14
Lsm8Q6ZWM4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Lsm8Q6ZWM4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Lsm8Q6ZWM4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Lsm8Q6ZWM4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Lsm8Q6ZWM4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.14■■□□□ 1.13
Lsm8Q6ZWM4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Lsm8Q6ZWM4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.13■■□□□ 1.13
Lsm8Q6ZWM4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lsm8Q6ZWM4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Lsm8Q6ZWM4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
Lsm8Q6ZWM4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lsm8Q6ZWM4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.12■■□□□ 1.13
Lsm8Q6ZWM4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lsm8Q6ZWM4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lsm8Q6ZWM4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lsm8Q6ZWM4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lsm8Q6ZWM4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Lsm8Q6ZWM4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lsm8Q6ZWM4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Lsm8Q6ZWM4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
Lsm8Q6ZWM4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Lsm8Q6ZWM4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Lsm8Q6ZWM4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Lsm8Q6ZWM4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Lsm8Q6ZWM4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Lsm8Q6ZWM4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lsm8Q6ZWM4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.09■■□□□ 1.13
Lsm8Q6ZWM4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lsm8Q6ZWM4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.09■■□□□ 1.13
Lsm8Q6ZWM4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lsm8Q6ZWM4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Lsm8Q6ZWM4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.09■■□□□ 1.13
Lsm8Q6ZWM4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lsm8Q6ZWM4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lsm8Q6ZWM4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Lsm8Q6ZWM4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lsm8Q6ZWM4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Lsm8Q6ZWM4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Lsm8Q6ZWM4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Lsm8Q6ZWM4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Lsm8Q6ZWM4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Lsm8Q6ZWM4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Lsm8Q6ZWM4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lsm8Q6ZWM4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lsm8Q6ZWM4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.07■■□□□ 1.12
Lsm8Q6ZWM4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lsm8Q6ZWM4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
Lsm8Q6ZWM4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Lsm8Q6ZWM4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lsm8Q6ZWM4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Lsm8Q6ZWM4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lsm8Q6ZWM4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lsm8Q6ZWM4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lsm8Q6ZWM4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Lsm8Q6ZWM4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lsm8Q6ZWM4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Lsm8Q6ZWM4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lsm8Q6ZWM4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Lsm8Q6ZWM4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Lsm8Q6ZWM4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.05■■□□□ 1.12
Lsm8Q6ZWM4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lsm8Q6ZWM4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.05■■□□□ 1.12
Lsm8Q6ZWM4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lsm8Q6ZWM4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lsm8Q6ZWM4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lsm8Q6ZWM4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.04■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms