Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gm15820-201ENSMUST00000201566 728 ntBASIC21.26■□□□□ 0.99
Casc4Q6P2L7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.26■□□□□ 0.99
Casc4Q6P2L7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.26■□□□□ 0.99
Casc4Q6P2L7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Casc4Q6P2L7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Casc4Q6P2L7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Casc4Q6P2L7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Casc4Q6P2L7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Casc4Q6P2L7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Casc4Q6P2L7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Casc4Q6P2L7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Casc4Q6P2L7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Casc4Q6P2L7 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.25■□□□□ 0.99
Casc4Q6P2L7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Casc4Q6P2L7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.25■□□□□ 0.99
Casc4Q6P2L7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Casc4Q6P2L7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
Casc4Q6P2L7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Casc4Q6P2L7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.24■□□□□ 0.99
Casc4Q6P2L7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Casc4Q6P2L7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.24■□□□□ 0.99
Casc4Q6P2L7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
Casc4Q6P2L7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Casc4Q6P2L7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Casc4Q6P2L7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Casc4Q6P2L7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Casc4Q6P2L7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Casc4Q6P2L7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Casc4Q6P2L7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Casc4Q6P2L7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.23■□□□□ 0.99
Casc4Q6P2L7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Casc4Q6P2L7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Casc4Q6P2L7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Casc4Q6P2L7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Casc4Q6P2L7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Casc4Q6P2L7 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.22■□□□□ 0.99
Casc4Q6P2L7 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.22■□□□□ 0.99
Casc4Q6P2L7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Casc4Q6P2L7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Casc4Q6P2L7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Casc4Q6P2L7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Casc4Q6P2L7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Casc4Q6P2L7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Casc4Q6P2L7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Casc4Q6P2L7 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.21■□□□□ 0.99
Casc4Q6P2L7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Casc4Q6P2L7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Casc4Q6P2L7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Casc4Q6P2L7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Casc4Q6P2L7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Casc4Q6P2L7 Gm15546-201ENSMUST00000122095 826 ntBASIC21.2■□□□□ 0.98
Casc4Q6P2L7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Casc4Q6P2L7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Casc4Q6P2L7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Casc4Q6P2L7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.19■□□□□ 0.98
Casc4Q6P2L7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.19■□□□□ 0.98
Casc4Q6P2L7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Casc4Q6P2L7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.19■□□□□ 0.98
Casc4Q6P2L7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.19■□□□□ 0.98
Casc4Q6P2L7 Gm10232-201ENSMUST00000089221 720 ntBASIC21.19■□□□□ 0.98
Casc4Q6P2L7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Casc4Q6P2L7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Casc4Q6P2L7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Casc4Q6P2L7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
Casc4Q6P2L7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Casc4Q6P2L7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Casc4Q6P2L7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Casc4Q6P2L7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Casc4Q6P2L7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Casc4Q6P2L7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Casc4Q6P2L7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Casc4Q6P2L7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Casc4Q6P2L7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Casc4Q6P2L7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Casc4Q6P2L7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Casc4Q6P2L7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Casc4Q6P2L7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.16■□□□□ 0.98
Casc4Q6P2L7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Casc4Q6P2L7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Casc4Q6P2L7 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.15■□□□□ 0.98
Casc4Q6P2L7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Casc4Q6P2L7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Casc4Q6P2L7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Casc4Q6P2L7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Casc4Q6P2L7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.14■□□□□ 0.98
Casc4Q6P2L7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Casc4Q6P2L7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Casc4Q6P2L7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Casc4Q6P2L7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Casc4Q6P2L7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Casc4Q6P2L7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Casc4Q6P2L7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Casc4Q6P2L7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Casc4Q6P2L7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.13■□□□□ 0.97
Casc4Q6P2L7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Casc4Q6P2L7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.13■□□□□ 0.97
Casc4Q6P2L7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Casc4Q6P2L7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Casc4Q6P2L7 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.13■□□□□ 0.97
Casc4Q6P2L7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms