Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Shroom1Q5SX79 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Shroom1Q5SX79 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Shroom1Q5SX79 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Shroom1Q5SX79 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Shroom1Q5SX79 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Shroom1Q5SX79 Gm43034-201ENSMUST00000198678 1364 ntBASIC22.42■■□□□ 1.18
Shroom1Q5SX79 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Shroom1Q5SX79 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.42■■□□□ 1.18
Shroom1Q5SX79 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.42■■□□□ 1.18
Shroom1Q5SX79 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Shroom1Q5SX79 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.42■■□□□ 1.18
Shroom1Q5SX79 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Shroom1Q5SX79 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Shroom1Q5SX79 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Shroom1Q5SX79 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Shroom1Q5SX79 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Shroom1Q5SX79 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Shroom1Q5SX79 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Shroom1Q5SX79 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Shroom1Q5SX79 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.4■■□□□ 1.18
Shroom1Q5SX79 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Shroom1Q5SX79 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Shroom1Q5SX79 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.4■■□□□ 1.18
Shroom1Q5SX79 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Shroom1Q5SX79 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.39■■□□□ 1.18
Shroom1Q5SX79 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Shroom1Q5SX79 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.39■■□□□ 1.17
Shroom1Q5SX79 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Shroom1Q5SX79 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Shroom1Q5SX79 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Shroom1Q5SX79 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Shroom1Q5SX79 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.38■■□□□ 1.17
Shroom1Q5SX79 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Shroom1Q5SX79 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Shroom1Q5SX79 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Shroom1Q5SX79 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Shroom1Q5SX79 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Shroom1Q5SX79 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Shroom1Q5SX79 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Shroom1Q5SX79 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Shroom1Q5SX79 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Shroom1Q5SX79 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Shroom1Q5SX79 Gm21956-201ENSMUST00000179946 522 ntBASIC22.36■■□□□ 1.17
Shroom1Q5SX79 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Shroom1Q5SX79 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Shroom1Q5SX79 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Shroom1Q5SX79 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Shroom1Q5SX79 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Shroom1Q5SX79 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Shroom1Q5SX79 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Shroom1Q5SX79 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Shroom1Q5SX79 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Shroom1Q5SX79 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Shroom1Q5SX79 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Shroom1Q5SX79 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.34■■□□□ 1.17
Shroom1Q5SX79 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Shroom1Q5SX79 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
Shroom1Q5SX79 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Shroom1Q5SX79 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Shroom1Q5SX79 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Shroom1Q5SX79 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Shroom1Q5SX79 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Shroom1Q5SX79 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Shroom1Q5SX79 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Shroom1Q5SX79 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC22.33■■□□□ 1.17
Shroom1Q5SX79 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.16
Shroom1Q5SX79 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Shroom1Q5SX79 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Shroom1Q5SX79 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Shroom1Q5SX79 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Shroom1Q5SX79 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Shroom1Q5SX79 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Shroom1Q5SX79 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.32■■□□□ 1.16
Shroom1Q5SX79 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.32■■□□□ 1.16
Shroom1Q5SX79 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.31■■□□□ 1.16
Shroom1Q5SX79 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC22.31■■□□□ 1.16
Shroom1Q5SX79 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.31■■□□□ 1.16
Shroom1Q5SX79 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.31■■□□□ 1.16
Shroom1Q5SX79 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Shroom1Q5SX79 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Shroom1Q5SX79 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Shroom1Q5SX79 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Shroom1Q5SX79 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Shroom1Q5SX79 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Shroom1Q5SX79 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.3■■□□□ 1.16
Shroom1Q5SX79 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Shroom1Q5SX79 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Shroom1Q5SX79 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC22.3■■□□□ 1.16
Shroom1Q5SX79 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Shroom1Q5SX79 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Shroom1Q5SX79 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.3■■□□□ 1.16
Shroom1Q5SX79 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Shroom1Q5SX79 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.3■■□□□ 1.16
Shroom1Q5SX79 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Shroom1Q5SX79 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Shroom1Q5SX79 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.3■■□□□ 1.16
Shroom1Q5SX79 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Shroom1Q5SX79 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Shroom1Q5SX79 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms