Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.83■■□□□ 1.25
R3hdm4Q4VBF2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
R3hdm4Q4VBF2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
R3hdm4Q4VBF2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.24
R3hdm4Q4VBF2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
R3hdm4Q4VBF2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
R3hdm4Q4VBF2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.82■■□□□ 1.24
R3hdm4Q4VBF2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.82■■□□□ 1.24
R3hdm4Q4VBF2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
R3hdm4Q4VBF2 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.82■■□□□ 1.24
R3hdm4Q4VBF2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.82■■□□□ 1.24
R3hdm4Q4VBF2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
R3hdm4Q4VBF2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
R3hdm4Q4VBF2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
R3hdm4Q4VBF2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
R3hdm4Q4VBF2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
R3hdm4Q4VBF2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.81■■□□□ 1.24
R3hdm4Q4VBF2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
R3hdm4Q4VBF2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
R3hdm4Q4VBF2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
R3hdm4Q4VBF2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
R3hdm4Q4VBF2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
R3hdm4Q4VBF2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.8■■□□□ 1.24
R3hdm4Q4VBF2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
R3hdm4Q4VBF2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC22.79■■□□□ 1.24
R3hdm4Q4VBF2 Gm32051-202ENSMUST00000197905 2385 ntBASIC22.79■■□□□ 1.24
R3hdm4Q4VBF2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
R3hdm4Q4VBF2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
R3hdm4Q4VBF2 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.79■■□□□ 1.24
R3hdm4Q4VBF2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.79■■□□□ 1.24
R3hdm4Q4VBF2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
R3hdm4Q4VBF2 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.79■■□□□ 1.24
R3hdm4Q4VBF2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
R3hdm4Q4VBF2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
R3hdm4Q4VBF2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
R3hdm4Q4VBF2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
R3hdm4Q4VBF2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
R3hdm4Q4VBF2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
R3hdm4Q4VBF2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
R3hdm4Q4VBF2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC22.77■■□□□ 1.24
R3hdm4Q4VBF2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
R3hdm4Q4VBF2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
R3hdm4Q4VBF2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.77■■□□□ 1.24
R3hdm4Q4VBF2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
R3hdm4Q4VBF2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
R3hdm4Q4VBF2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
R3hdm4Q4VBF2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
R3hdm4Q4VBF2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
R3hdm4Q4VBF2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.76■■□□□ 1.23
R3hdm4Q4VBF2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
R3hdm4Q4VBF2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
R3hdm4Q4VBF2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC22.75■■□□□ 1.23
R3hdm4Q4VBF2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
R3hdm4Q4VBF2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
R3hdm4Q4VBF2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
R3hdm4Q4VBF2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
R3hdm4Q4VBF2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC22.74■■□□□ 1.23
R3hdm4Q4VBF2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
R3hdm4Q4VBF2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
R3hdm4Q4VBF2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22.74■■□□□ 1.23
R3hdm4Q4VBF2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.74■■□□□ 1.23
R3hdm4Q4VBF2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
R3hdm4Q4VBF2 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.74■■□□□ 1.23
R3hdm4Q4VBF2 Gm9959-201ENSMUST00000068277 390 ntBASIC22.74■■□□□ 1.23
R3hdm4Q4VBF2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
R3hdm4Q4VBF2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
R3hdm4Q4VBF2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
R3hdm4Q4VBF2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
R3hdm4Q4VBF2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
R3hdm4Q4VBF2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
R3hdm4Q4VBF2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.73■■□□□ 1.23
R3hdm4Q4VBF2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
R3hdm4Q4VBF2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
R3hdm4Q4VBF2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
R3hdm4Q4VBF2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.72■■□□□ 1.23
R3hdm4Q4VBF2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
R3hdm4Q4VBF2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
R3hdm4Q4VBF2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.72■■□□□ 1.23
R3hdm4Q4VBF2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.72■■□□□ 1.23
R3hdm4Q4VBF2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.72■■□□□ 1.23
R3hdm4Q4VBF2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
R3hdm4Q4VBF2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
R3hdm4Q4VBF2 Gm10399-202ENSMUST00000202768 748 ntBASIC22.71■■□□□ 1.23
R3hdm4Q4VBF2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
R3hdm4Q4VBF2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
R3hdm4Q4VBF2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
R3hdm4Q4VBF2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.23
R3hdm4Q4VBF2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
R3hdm4Q4VBF2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
R3hdm4Q4VBF2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
R3hdm4Q4VBF2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
R3hdm4Q4VBF2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
R3hdm4Q4VBF2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.69■■□□□ 1.22
R3hdm4Q4VBF2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.69■■□□□ 1.22
R3hdm4Q4VBF2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.69■■□□□ 1.22
R3hdm4Q4VBF2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
R3hdm4Q4VBF2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
R3hdm4Q4VBF2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC22.69■■□□□ 1.22
R3hdm4Q4VBF2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
R3hdm4Q4VBF2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms