Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Brf2Q3UAW9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Brf2Q3UAW9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Brf2Q3UAW9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.83■□□□□ 0.76
Brf2Q3UAW9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Brf2Q3UAW9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Brf2Q3UAW9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Brf2Q3UAW9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Brf2Q3UAW9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Brf2Q3UAW9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brf2Q3UAW9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Brf2Q3UAW9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.81■□□□□ 0.76
Brf2Q3UAW9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.81■□□□□ 0.76
Brf2Q3UAW9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brf2Q3UAW9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Brf2Q3UAW9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Brf2Q3UAW9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brf2Q3UAW9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brf2Q3UAW9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.8■□□□□ 0.76
Brf2Q3UAW9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.8■□□□□ 0.76
Brf2Q3UAW9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.8■□□□□ 0.76
Brf2Q3UAW9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brf2Q3UAW9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brf2Q3UAW9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brf2Q3UAW9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brf2Q3UAW9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brf2Q3UAW9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Brf2Q3UAW9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Brf2Q3UAW9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brf2Q3UAW9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Brf2Q3UAW9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brf2Q3UAW9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brf2Q3UAW9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Brf2Q3UAW9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brf2Q3UAW9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brf2Q3UAW9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.78■□□□□ 0.76
Brf2Q3UAW9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Brf2Q3UAW9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Brf2Q3UAW9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Brf2Q3UAW9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Brf2Q3UAW9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.77■□□□□ 0.76
Brf2Q3UAW9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Brf2Q3UAW9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Brf2Q3UAW9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.77■□□□□ 0.76
Brf2Q3UAW9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Brf2Q3UAW9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Brf2Q3UAW9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Brf2Q3UAW9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Brf2Q3UAW9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Brf2Q3UAW9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.76■□□□□ 0.75
Brf2Q3UAW9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Brf2Q3UAW9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brf2Q3UAW9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Brf2Q3UAW9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brf2Q3UAW9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Brf2Q3UAW9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Brf2Q3UAW9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Brf2Q3UAW9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Brf2Q3UAW9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Brf2Q3UAW9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Brf2Q3UAW9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Brf2Q3UAW9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Brf2Q3UAW9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Brf2Q3UAW9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.74■□□□□ 0.75
Brf2Q3UAW9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Brf2Q3UAW9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Brf2Q3UAW9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Brf2Q3UAW9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brf2Q3UAW9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.73■□□□□ 0.75
Brf2Q3UAW9 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.73■□□□□ 0.75
Brf2Q3UAW9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.73■□□□□ 0.75
Brf2Q3UAW9 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.73■□□□□ 0.75
Brf2Q3UAW9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brf2Q3UAW9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brf2Q3UAW9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Brf2Q3UAW9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brf2Q3UAW9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Brf2Q3UAW9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Brf2Q3UAW9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.72■□□□□ 0.75
Brf2Q3UAW9 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.72■□□□□ 0.75
Brf2Q3UAW9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Brf2Q3UAW9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Brf2Q3UAW9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Brf2Q3UAW9 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.72■□□□□ 0.75
Brf2Q3UAW9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.72■□□□□ 0.75
Brf2Q3UAW9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Brf2Q3UAW9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Brf2Q3UAW9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Brf2Q3UAW9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Brf2Q3UAW9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Brf2Q3UAW9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Brf2Q3UAW9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Brf2Q3UAW9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Brf2Q3UAW9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Brf2Q3UAW9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Brf2Q3UAW9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Brf2Q3UAW9 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.7■□□□□ 0.74
Brf2Q3UAW9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Brf2Q3UAW9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.7■□□□□ 0.74
Brf2Q3UAW9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms