Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.41■□□□□ 0.7
Col10a1Q05306 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col10a1Q05306 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col10a1Q05306 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Col10a1Q05306 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Col10a1Q05306 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Col10a1Q05306 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col10a1Q05306 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Col10a1Q05306 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Col10a1Q05306 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Col10a1Q05306 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.39■□□□□ 0.69
Col10a1Q05306 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col10a1Q05306 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col10a1Q05306 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col10a1Q05306 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col10a1Q05306 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col10a1Q05306 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col10a1Q05306 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col10a1Q05306 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Col10a1Q05306 Gm15546-201ENSMUST00000122095 826 ntBASIC19.38■□□□□ 0.69
Col10a1Q05306 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col10a1Q05306 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col10a1Q05306 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col10a1Q05306 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col10a1Q05306 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col10a1Q05306 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col10a1Q05306 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col10a1Q05306 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.37■□□□□ 0.69
Col10a1Q05306 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col10a1Q05306 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.37■□□□□ 0.69
Col10a1Q05306 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col10a1Q05306 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col10a1Q05306 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col10a1Q05306 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col10a1Q05306 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col10a1Q05306 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col10a1Q05306 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.36■□□□□ 0.69
Col10a1Q05306 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col10a1Q05306 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col10a1Q05306 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Col10a1Q05306 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col10a1Q05306 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Col10a1Q05306 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col10a1Q05306 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.35■□□□□ 0.69
Col10a1Q05306 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col10a1Q05306 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Col10a1Q05306 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col10a1Q05306 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col10a1Q05306 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.35■□□□□ 0.69
Col10a1Q05306 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col10a1Q05306 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col10a1Q05306 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Col10a1Q05306 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col10a1Q05306 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col10a1Q05306 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col10a1Q05306 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col10a1Q05306 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Col10a1Q05306 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col10a1Q05306 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Col10a1Q05306 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col10a1Q05306 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Col10a1Q05306 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col10a1Q05306 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col10a1Q05306 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col10a1Q05306 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col10a1Q05306 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Col10a1Q05306 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col10a1Q05306 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.33■□□□□ 0.69
Col10a1Q05306 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col10a1Q05306 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Col10a1Q05306 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col10a1Q05306 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col10a1Q05306 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.31■□□□□ 0.68
Col10a1Q05306 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col10a1Q05306 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Col10a1Q05306 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col10a1Q05306 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col10a1Q05306 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col10a1Q05306 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col10a1Q05306 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.3■□□□□ 0.68
Col10a1Q05306 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.3■□□□□ 0.68
Col10a1Q05306 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Col10a1Q05306 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col10a1Q05306 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.3■□□□□ 0.68
Col10a1Q05306 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Col10a1Q05306 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Col10a1Q05306 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col10a1Q05306 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col10a1Q05306 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col10a1Q05306 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.29■□□□□ 0.68
Col10a1Q05306 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.29■□□□□ 0.68
Col10a1Q05306 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.29■□□□□ 0.68
Col10a1Q05306 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col10a1Q05306 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Col10a1Q05306 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col10a1Q05306 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.29■□□□□ 0.68
Col10a1Q05306 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col10a1Q05306 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.29■□□□□ 0.68
Col10a1Q05306 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col10a1Q05306 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms