Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Srp9P49962 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Srp9P49962 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.74■□□□□ 0.43
Srp9P49962 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Srp9P49962 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Srp9P49962 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Srp9P49962 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.73■□□□□ 0.43
Srp9P49962 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.73■□□□□ 0.43
Srp9P49962 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Srp9P49962 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Srp9P49962 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Srp9P49962 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Srp9P49962 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.73■□□□□ 0.43
Srp9P49962 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srp9P49962 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srp9P49962 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srp9P49962 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srp9P49962 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srp9P49962 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srp9P49962 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.72■□□□□ 0.43
Srp9P49962 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srp9P49962 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srp9P49962 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srp9P49962 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srp9P49962 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.71■□□□□ 0.43
Srp9P49962 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srp9P49962 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srp9P49962 Gm27502-201ENSMUST00000183495 199 ntBASIC17.7■□□□□ 0.42
Srp9P49962 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.7■□□□□ 0.42
Srp9P49962 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srp9P49962 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Srp9P49962 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srp9P49962 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.69■□□□□ 0.42
Srp9P49962 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srp9P49962 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srp9P49962 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srp9P49962 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srp9P49962 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Srp9P49962 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Srp9P49962 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.69■□□□□ 0.42
Srp9P49962 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Srp9P49962 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Srp9P49962 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srp9P49962 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srp9P49962 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srp9P49962 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srp9P49962 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srp9P49962 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Srp9P49962 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Srp9P49962 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Srp9P49962 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srp9P49962 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srp9P49962 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Srp9P49962 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srp9P49962 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srp9P49962 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Srp9P49962 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srp9P49962 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Srp9P49962 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srp9P49962 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srp9P49962 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Srp9P49962 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srp9P49962 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srp9P49962 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srp9P49962 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srp9P49962 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srp9P49962 Gm14523-201ENSMUST00000117260 558 ntBASIC17.66■□□□□ 0.42
Srp9P49962 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srp9P49962 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srp9P49962 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srp9P49962 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Srp9P49962 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Srp9P49962 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Srp9P49962 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Srp9P49962 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.65■□□□□ 0.42
Srp9P49962 Gm7332-201ENSMUST00000118351 454 ntBASIC17.65■□□□□ 0.42
Srp9P49962 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.65■□□□□ 0.42
Srp9P49962 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Srp9P49962 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Srp9P49962 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Srp9P49962 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Srp9P49962 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Srp9P49962 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.65■□□□□ 0.42
Srp9P49962 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Srp9P49962 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Srp9P49962 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.64■□□□□ 0.41
Srp9P49962 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Srp9P49962 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.64■□□□□ 0.41
Srp9P49962 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Srp9P49962 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Srp9P49962 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Srp9P49962 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Srp9P49962 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Srp9P49962 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.63■□□□□ 0.41
Srp9P49962 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.63■□□□□ 0.41
Srp9P49962 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.63■□□□□ 0.41
Srp9P49962 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Srp9P49962 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Srp9P49962 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Srp9P49962 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms