Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdx2P43241 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdx2P43241 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.2■□□□□ 0.82
Cdx2P43241 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Cdx2P43241 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdx2P43241 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Cdx2P43241 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.2■□□□□ 0.82
Cdx2P43241 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Cdx2P43241 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.19■□□□□ 0.82
Cdx2P43241 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.19■□□□□ 0.82
Cdx2P43241 Gm18284-201ENSMUST00000172604 624 ntBASIC20.19■□□□□ 0.82
Cdx2P43241 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdx2P43241 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdx2P43241 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdx2P43241 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdx2P43241 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdx2P43241 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdx2P43241 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.18■□□□□ 0.82
Cdx2P43241 Gm43137-201ENSMUST00000198052 594 ntBASIC20.18■□□□□ 0.82
Cdx2P43241 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.18■□□□□ 0.82
Cdx2P43241 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.18■□□□□ 0.82
Cdx2P43241 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Cdx2P43241 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdx2P43241 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdx2P43241 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdx2P43241 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.17■□□□□ 0.82
Cdx2P43241 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cdx2P43241 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdx2P43241 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdx2P43241 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cdx2P43241 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.17■□□□□ 0.82
Cdx2P43241 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.17■□□□□ 0.82
Cdx2P43241 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.17■□□□□ 0.82
Cdx2P43241 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.17■□□□□ 0.82
Cdx2P43241 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdx2P43241 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.16■□□□□ 0.82
Cdx2P43241 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Cdx2P43241 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdx2P43241 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.16■□□□□ 0.82
Cdx2P43241 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cdx2P43241 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdx2P43241 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdx2P43241 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cdx2P43241 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdx2P43241 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Cdx2P43241 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdx2P43241 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdx2P43241 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdx2P43241 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdx2P43241 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdx2P43241 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cdx2P43241 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.15■□□□□ 0.82
Cdx2P43241 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdx2P43241 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdx2P43241 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdx2P43241 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cdx2P43241 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cdx2P43241 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.14■□□□□ 0.81
Cdx2P43241 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdx2P43241 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Cdx2P43241 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdx2P43241 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdx2P43241 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Cdx2P43241 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdx2P43241 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdx2P43241 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Cdx2P43241 Mir7075-201ENSMUST00000184187 82 ntBASIC20.13■□□□□ 0.81
Cdx2P43241 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdx2P43241 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdx2P43241 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cdx2P43241 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdx2P43241 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdx2P43241 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
Cdx2P43241 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cdx2P43241 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Cdx2P43241 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdx2P43241 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdx2P43241 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdx2P43241 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.11■□□□□ 0.81
Cdx2P43241 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cdx2P43241 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
Cdx2P43241 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.11■□□□□ 0.81
Cdx2P43241 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Cdx2P43241 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Cdx2P43241 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cdx2P43241 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.1■□□□□ 0.81
Cdx2P43241 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cdx2P43241 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cdx2P43241 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdx2P43241 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdx2P43241 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdx2P43241 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdx2P43241 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cdx2P43241 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.09■□□□□ 0.81
Cdx2P43241 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdx2P43241 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.09■□□□□ 0.81
Cdx2P43241 Gm43017-201ENSMUST00000198296 752 ntBASIC20.09■□□□□ 0.81
Cdx2P43241 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.09■□□□□ 0.81
Cdx2P43241 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.09■□□□□ 0.81
Cdx2P43241 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms