Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cd27P41272 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Cd27P41272 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cd27P41272 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.95■□□□□ 0.3
Cd27P41272 Gm10232-201ENSMUST00000089221 720 ntBASIC16.95■□□□□ 0.3
Cd27P41272 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd27P41272 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
Cd27P41272 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cd27P41272 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cd27P41272 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd27P41272 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd27P41272 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd27P41272 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd27P41272 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd27P41272 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd27P41272 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.94■□□□□ 0.3
Cd27P41272 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Cd27P41272 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cd27P41272 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd27P41272 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.94■□□□□ 0.3
Cd27P41272 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd27P41272 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd27P41272 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.93■□□□□ 0.3
Cd27P41272 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.93■□□□□ 0.3
Cd27P41272 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd27P41272 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd27P41272 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd27P41272 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cd27P41272 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd27P41272 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd27P41272 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd27P41272 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd27P41272 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd27P41272 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd27P41272 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd27P41272 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cd27P41272 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd27P41272 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd27P41272 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd27P41272 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd27P41272 Gm15820-201ENSMUST00000201566 728 ntBASIC16.91■□□□□ 0.3
Cd27P41272 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.91■□□□□ 0.3
Cd27P41272 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd27P41272 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd27P41272 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.9■□□□□ 0.3
Cd27P41272 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd27P41272 Gm15546-201ENSMUST00000122095 826 ntBASIC16.9■□□□□ 0.3
Cd27P41272 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.9■□□□□ 0.3
Cd27P41272 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.9■□□□□ 0.3
Cd27P41272 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd27P41272 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cd27P41272 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
Cd27P41272 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.89■□□□□ 0.29
Cd27P41272 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd27P41272 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd27P41272 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cd27P41272 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd27P41272 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cd27P41272 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cd27P41272 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.88■□□□□ 0.29
Cd27P41272 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd27P41272 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.88■□□□□ 0.29
Cd27P41272 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd27P41272 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd27P41272 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd27P41272 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.88■□□□□ 0.29
Cd27P41272 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd27P41272 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd27P41272 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd27P41272 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd27P41272 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd27P41272 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Cd27P41272 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.87■□□□□ 0.29
Cd27P41272 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.87■□□□□ 0.29
Cd27P41272 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd27P41272 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.87■□□□□ 0.29
Cd27P41272 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd27P41272 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd27P41272 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd27P41272 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd27P41272 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd27P41272 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.86■□□□□ 0.29
Cd27P41272 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cd27P41272 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.86■□□□□ 0.29
Cd27P41272 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.86■□□□□ 0.29
Cd27P41272 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cd27P41272 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.86■□□□□ 0.29
Cd27P41272 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.86■□□□□ 0.29
Cd27P41272 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd27P41272 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cd27P41272 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd27P41272 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cd27P41272 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd27P41272 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd27P41272 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd27P41272 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.85■□□□□ 0.29
Cd27P41272 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd27P41272 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cd27P41272 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd27P41272 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms