Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Kdm5cP41230 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
Kdm5cP41230 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Kdm5cP41230 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Kdm5cP41230 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Kdm5cP41230 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Kdm5cP41230 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
Kdm5cP41230 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Kdm5cP41230 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Kdm5cP41230 Gm10657-201ENSMUST00000193528 1031 ntBASIC31.37■■■□□ 2.61
Kdm5cP41230 Gm5874-201ENSMUST00000096101 508 ntBASIC31.37■■■□□ 2.61
Kdm5cP41230 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
Kdm5cP41230 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC31.36■■■□□ 2.61
Kdm5cP41230 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Kdm5cP41230 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC31.36■■■□□ 2.61
Kdm5cP41230 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
Kdm5cP41230 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Kdm5cP41230 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Kdm5cP41230 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
Kdm5cP41230 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC31.35■■■□□ 2.61
Kdm5cP41230 Gm8770-201ENSMUST00000121113 1109 ntBASIC31.34■■■□□ 2.61
Kdm5cP41230 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Kdm5cP41230 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Kdm5cP41230 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Kdm5cP41230 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Kdm5cP41230 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
Kdm5cP41230 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC31.34■■■□□ 2.61
Kdm5cP41230 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC31.34■■■□□ 2.61
Kdm5cP41230 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC31.34■■■□□ 2.61
Kdm5cP41230 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Kdm5cP41230 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Kdm5cP41230 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Kdm5cP41230 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Kdm5cP41230 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
Kdm5cP41230 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Kdm5cP41230 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Kdm5cP41230 AC153890.1-201ENSMUST00000220021 2469 ntBASIC31.31■■■□□ 2.6
Kdm5cP41230 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Kdm5cP41230 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC31.31■■■□□ 2.6
Kdm5cP41230 Wdr70-203ENSMUST00000227371 1130 ntBASIC31.31■■■□□ 2.6
Kdm5cP41230 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
Kdm5cP41230 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Kdm5cP41230 Gm26571-201ENSMUST00000181399 666 ntBASIC31.3■■■□□ 2.6
Kdm5cP41230 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Kdm5cP41230 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Kdm5cP41230 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Kdm5cP41230 Gm8493-201ENSMUST00000196881 489 ntBASIC31.3■■■□□ 2.6
Kdm5cP41230 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Kdm5cP41230 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Kdm5cP41230 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
Kdm5cP41230 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC31.29■■■□□ 2.6
Kdm5cP41230 Gm10849-201ENSMUST00000100397 618 ntBASIC31.28■■■□□ 2.6
Kdm5cP41230 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Kdm5cP41230 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC31.27■■■□□ 2.6
Kdm5cP41230 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Kdm5cP41230 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Kdm5cP41230 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Kdm5cP41230 Gm7291-201ENSMUST00000199147 382 ntBASIC31.26■■■□□ 2.59
Kdm5cP41230 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Kdm5cP41230 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Kdm5cP41230 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Kdm5cP41230 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Kdm5cP41230 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC31.25■■■□□ 2.59
Kdm5cP41230 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC31.25■■■□□ 2.59
Kdm5cP41230 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Kdm5cP41230 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Kdm5cP41230 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC31.24■■■□□ 2.59
Kdm5cP41230 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC31.24■■■□□ 2.59
Kdm5cP41230 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Kdm5cP41230 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Kdm5cP41230 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Kdm5cP41230 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Kdm5cP41230 Gm6934-201ENSMUST00000194780 1905 ntBASIC31.24■■■□□ 2.59
Kdm5cP41230 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Kdm5cP41230 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Kdm5cP41230 AC158990.1-201ENSMUST00000221450 2016 ntBASIC31.23■■■□□ 2.59
Kdm5cP41230 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC31.23■■■□□ 2.59
Kdm5cP41230 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Kdm5cP41230 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Kdm5cP41230 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Kdm5cP41230 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
Kdm5cP41230 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Kdm5cP41230 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Kdm5cP41230 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC31.22■■■□□ 2.59
Kdm5cP41230 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Kdm5cP41230 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC31.22■■■□□ 2.59
Kdm5cP41230 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC31.21■■■□□ 2.59
Kdm5cP41230 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC31.21■■■□□ 2.59
Kdm5cP41230 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
Kdm5cP41230 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC31.2■■■□□ 2.59
Kdm5cP41230 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Kdm5cP41230 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC31.2■■■□□ 2.59
Kdm5cP41230 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
Kdm5cP41230 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC31.2■■■□□ 2.58
Kdm5cP41230 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Kdm5cP41230 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.58
Kdm5cP41230 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Kdm5cP41230 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Kdm5cP41230 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Kdm5cP41230 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC31.18■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms