Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tgfb1P04202 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tgfb1P04202 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tgfb1P04202 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tgfb1P04202 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tgfb1P04202 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tgfb1P04202 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tgfb1P04202 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Tgfb1P04202 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tgfb1P04202 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tgfb1P04202 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tgfb1P04202 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.49■□□□□ 0.71
Tgfb1P04202 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tgfb1P04202 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tgfb1P04202 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tgfb1P04202 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tgfb1P04202 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tgfb1P04202 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.48■□□□□ 0.71
Tgfb1P04202 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
Tgfb1P04202 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tgfb1P04202 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tgfb1P04202 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tgfb1P04202 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.47■□□□□ 0.71
Tgfb1P04202 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.47■□□□□ 0.71
Tgfb1P04202 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tgfb1P04202 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.47■□□□□ 0.71
Tgfb1P04202 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.47■□□□□ 0.71
Tgfb1P04202 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tgfb1P04202 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tgfb1P04202 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Tgfb1P04202 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tgfb1P04202 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tgfb1P04202 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.45■□□□□ 0.7
Tgfb1P04202 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tgfb1P04202 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tgfb1P04202 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tgfb1P04202 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tgfb1P04202 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Tgfb1P04202 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tgfb1P04202 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tgfb1P04202 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Tgfb1P04202 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.44■□□□□ 0.7
Tgfb1P04202 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tgfb1P04202 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tgfb1P04202 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.44■□□□□ 0.7
Tgfb1P04202 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
Tgfb1P04202 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tgfb1P04202 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tgfb1P04202 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tgfb1P04202 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tgfb1P04202 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tgfb1P04202 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tgfb1P04202 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tgfb1P04202 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tgfb1P04202 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tgfb1P04202 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.43■□□□□ 0.7
Tgfb1P04202 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tgfb1P04202 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.43■□□□□ 0.7
Tgfb1P04202 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tgfb1P04202 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tgfb1P04202 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tgfb1P04202 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tgfb1P04202 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tgfb1P04202 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tgfb1P04202 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tgfb1P04202 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.42■□□□□ 0.7
Tgfb1P04202 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.42■□□□□ 0.7
Tgfb1P04202 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Tgfb1P04202 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tgfb1P04202 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tgfb1P04202 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tgfb1P04202 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tgfb1P04202 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.41■□□□□ 0.7
Tgfb1P04202 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
Tgfb1P04202 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.41■□□□□ 0.7
Tgfb1P04202 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Tgfb1P04202 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tgfb1P04202 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tgfb1P04202 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tgfb1P04202 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.4■□□□□ 0.7
Tgfb1P04202 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tgfb1P04202 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tgfb1P04202 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.4■□□□□ 0.7
Tgfb1P04202 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tgfb1P04202 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tgfb1P04202 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tgfb1P04202 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.4■□□□□ 0.7
Tgfb1P04202 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tgfb1P04202 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tgfb1P04202 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tgfb1P04202 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tgfb1P04202 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tgfb1P04202 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tgfb1P04202 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tgfb1P04202 Gm13238-201ENSMUST00000117655 780 ntBASIC19.39■□□□□ 0.69
Tgfb1P04202 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tgfb1P04202 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tgfb1P04202 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Tgfb1P04202 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tgfb1P04202 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms