Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc28a2O88627 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.58■□□□□ 0.56
Slc28a2O88627 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc28a2O88627 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc28a2O88627 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc28a2O88627 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc28a2O88627 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc28a2O88627 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Slc28a2O88627 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.57■□□□□ 0.56
Slc28a2O88627 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc28a2O88627 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Slc28a2O88627 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc28a2O88627 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slc28a2O88627 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slc28a2O88627 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Slc28a2O88627 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc28a2O88627 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.56■□□□□ 0.56
Slc28a2O88627 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.56■□□□□ 0.56
Slc28a2O88627 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.56■□□□□ 0.56
Slc28a2O88627 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc28a2O88627 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc28a2O88627 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slc28a2O88627 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc28a2O88627 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.55■□□□□ 0.56
Slc28a2O88627 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc28a2O88627 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc28a2O88627 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.55■□□□□ 0.56
Slc28a2O88627 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc28a2O88627 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc28a2O88627 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Slc28a2O88627 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc28a2O88627 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.55■□□□□ 0.56
Slc28a2O88627 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.54■□□□□ 0.56
Slc28a2O88627 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.54■□□□□ 0.56
Slc28a2O88627 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc28a2O88627 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc28a2O88627 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Slc28a2O88627 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Slc28a2O88627 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc28a2O88627 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc28a2O88627 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc28a2O88627 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc28a2O88627 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slc28a2O88627 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slc28a2O88627 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc28a2O88627 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Slc28a2O88627 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc28a2O88627 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Slc28a2O88627 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Slc28a2O88627 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc28a2O88627 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Slc28a2O88627 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc28a2O88627 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.52■□□□□ 0.55
Slc28a2O88627 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc28a2O88627 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc28a2O88627 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc28a2O88627 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Slc28a2O88627 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc28a2O88627 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc28a2O88627 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.51■□□□□ 0.55
Slc28a2O88627 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc28a2O88627 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Slc28a2O88627 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc28a2O88627 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc28a2O88627 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Slc28a2O88627 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slc28a2O88627 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.5■□□□□ 0.55
Slc28a2O88627 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slc28a2O88627 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.5■□□□□ 0.55
Slc28a2O88627 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc28a2O88627 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slc28a2O88627 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc28a2O88627 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc28a2O88627 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc28a2O88627 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Slc28a2O88627 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Slc28a2O88627 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc28a2O88627 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Slc28a2O88627 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc28a2O88627 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc28a2O88627 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc28a2O88627 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Slc28a2O88627 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc28a2O88627 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc28a2O88627 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc28a2O88627 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc28a2O88627 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc28a2O88627 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc28a2O88627 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Slc28a2O88627 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Slc28a2O88627 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc28a2O88627 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc28a2O88627 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.47■□□□□ 0.55
Slc28a2O88627 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc28a2O88627 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slc28a2O88627 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc28a2O88627 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc28a2O88627 Gm10420-201ENSMUST00000121713 882 ntBASIC18.47■□□□□ 0.55
Slc28a2O88627 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.47■□□□□ 0.55
Slc28a2O88627 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms