Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.35■□□□□ 0.37
SncaO55042 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.35■□□□□ 0.37
SncaO55042 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SncaO55042 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SncaO55042 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.34■□□□□ 0.37
SncaO55042 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SncaO55042 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
SncaO55042 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SncaO55042 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SncaO55042 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SncaO55042 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.33■□□□□ 0.37
SncaO55042 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SncaO55042 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SncaO55042 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SncaO55042 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SncaO55042 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
SncaO55042 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SncaO55042 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.33■□□□□ 0.36
SncaO55042 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SncaO55042 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SncaO55042 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
SncaO55042 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SncaO55042 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SncaO55042 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SncaO55042 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SncaO55042 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SncaO55042 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SncaO55042 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SncaO55042 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SncaO55042 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SncaO55042 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SncaO55042 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.31■□□□□ 0.36
SncaO55042 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SncaO55042 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SncaO55042 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SncaO55042 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SncaO55042 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SncaO55042 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SncaO55042 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SncaO55042 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SncaO55042 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SncaO55042 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
SncaO55042 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.3■□□□□ 0.36
SncaO55042 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SncaO55042 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SncaO55042 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
SncaO55042 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SncaO55042 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SncaO55042 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.28■□□□□ 0.36
SncaO55042 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SncaO55042 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SncaO55042 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SncaO55042 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SncaO55042 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SncaO55042 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SncaO55042 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SncaO55042 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SncaO55042 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SncaO55042 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SncaO55042 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.27■□□□□ 0.35
SncaO55042 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SncaO55042 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SncaO55042 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SncaO55042 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SncaO55042 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SncaO55042 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SncaO55042 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SncaO55042 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SncaO55042 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SncaO55042 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SncaO55042 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SncaO55042 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SncaO55042 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SncaO55042 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.25■□□□□ 0.35
SncaO55042 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SncaO55042 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SncaO55042 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SncaO55042 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SncaO55042 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SncaO55042 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SncaO55042 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.25■□□□□ 0.35
SncaO55042 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SncaO55042 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SncaO55042 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SncaO55042 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.24■□□□□ 0.35
SncaO55042 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SncaO55042 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.24■□□□□ 0.35
SncaO55042 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SncaO55042 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SncaO55042 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SncaO55042 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SncaO55042 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SncaO55042 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SncaO55042 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.23■□□□□ 0.35
SncaO55042 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SncaO55042 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SncaO55042 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SncaO55042 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SncaO55042 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SncaO55042 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 144.6 ms