Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DffbO54788 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DffbO54788 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.96■□□□□ 0.47
DffbO54788 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DffbO54788 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
DffbO54788 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DffbO54788 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DffbO54788 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.95■□□□□ 0.46
DffbO54788 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
DffbO54788 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DffbO54788 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DffbO54788 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DffbO54788 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
DffbO54788 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.94■□□□□ 0.46
DffbO54788 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DffbO54788 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
DffbO54788 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
DffbO54788 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DffbO54788 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DffbO54788 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DffbO54788 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DffbO54788 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DffbO54788 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DffbO54788 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DffbO54788 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.93■□□□□ 0.46
DffbO54788 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DffbO54788 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.93■□□□□ 0.46
DffbO54788 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DffbO54788 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DffbO54788 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
DffbO54788 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DffbO54788 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
DffbO54788 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.92■□□□□ 0.46
DffbO54788 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DffbO54788 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DffbO54788 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DffbO54788 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DffbO54788 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DffbO54788 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DffbO54788 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DffbO54788 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
DffbO54788 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.92■□□□□ 0.46
DffbO54788 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
DffbO54788 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.92■□□□□ 0.46
DffbO54788 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DffbO54788 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DffbO54788 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
DffbO54788 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
DffbO54788 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DffbO54788 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
DffbO54788 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.91■□□□□ 0.46
DffbO54788 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
DffbO54788 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DffbO54788 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DffbO54788 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DffbO54788 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DffbO54788 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DffbO54788 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DffbO54788 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DffbO54788 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DffbO54788 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DffbO54788 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
DffbO54788 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
DffbO54788 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
DffbO54788 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.9■□□□□ 0.46
DffbO54788 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
DffbO54788 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
DffbO54788 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
DffbO54788 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
DffbO54788 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
DffbO54788 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
DffbO54788 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DffbO54788 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DffbO54788 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DffbO54788 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DffbO54788 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DffbO54788 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
DffbO54788 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DffbO54788 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
DffbO54788 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DffbO54788 Iqck-206ENSMUST00000208658 2891 ntBASIC17.89■□□□□ 0.45
DffbO54788 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.88■□□□□ 0.45
DffbO54788 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
DffbO54788 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
DffbO54788 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
DffbO54788 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DffbO54788 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DffbO54788 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
DffbO54788 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.88■□□□□ 0.45
DffbO54788 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DffbO54788 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
DffbO54788 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DffbO54788 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DffbO54788 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.87■□□□□ 0.45
DffbO54788 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
DffbO54788 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.87■□□□□ 0.45
DffbO54788 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DffbO54788 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DffbO54788 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
DffbO54788 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms