Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hps1O08983 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hps1O08983 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hps1O08983 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hps1O08983 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.27■□□□□ 0.68
Hps1O08983 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hps1O08983 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hps1O08983 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hps1O08983 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.27■□□□□ 0.67
Hps1O08983 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hps1O08983 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Hps1O08983 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Hps1O08983 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Hps1O08983 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hps1O08983 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hps1O08983 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hps1O08983 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hps1O08983 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hps1O08983 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hps1O08983 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hps1O08983 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.25■□□□□ 0.67
Hps1O08983 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hps1O08983 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hps1O08983 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hps1O08983 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hps1O08983 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hps1O08983 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hps1O08983 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.24■□□□□ 0.67
Hps1O08983 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hps1O08983 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Hps1O08983 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.24■□□□□ 0.67
Hps1O08983 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Hps1O08983 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hps1O08983 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hps1O08983 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Hps1O08983 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hps1O08983 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hps1O08983 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.23■□□□□ 0.67
Hps1O08983 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Hps1O08983 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.23■□□□□ 0.67
Hps1O08983 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hps1O08983 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hps1O08983 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Hps1O08983 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hps1O08983 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hps1O08983 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Hps1O08983 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hps1O08983 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hps1O08983 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hps1O08983 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hps1O08983 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hps1O08983 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hps1O08983 Rps24-207ENSMUST00000224568 714 ntBASIC19.21■□□□□ 0.67
Hps1O08983 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hps1O08983 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hps1O08983 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hps1O08983 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.2■□□□□ 0.66
Hps1O08983 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hps1O08983 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hps1O08983 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hps1O08983 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hps1O08983 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.19■□□□□ 0.66
Hps1O08983 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hps1O08983 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.19■□□□□ 0.66
Hps1O08983 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hps1O08983 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.19■□□□□ 0.66
Hps1O08983 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hps1O08983 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hps1O08983 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Hps1O08983 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hps1O08983 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hps1O08983 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hps1O08983 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hps1O08983 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hps1O08983 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hps1O08983 Gm15820-201ENSMUST00000201566 728 ntBASIC19.18■□□□□ 0.66
Hps1O08983 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.18■□□□□ 0.66
Hps1O08983 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hps1O08983 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Hps1O08983 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hps1O08983 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hps1O08983 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hps1O08983 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hps1O08983 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.17■□□□□ 0.66
Hps1O08983 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Hps1O08983 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.17■□□□□ 0.66
Hps1O08983 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Hps1O08983 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hps1O08983 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.17■□□□□ 0.66
Hps1O08983 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.17■□□□□ 0.66
Hps1O08983 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hps1O08983 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hps1O08983 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hps1O08983 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hps1O08983 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hps1O08983 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.16■□□□□ 0.66
Hps1O08983 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hps1O08983 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hps1O08983 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Hps1O08983 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms