Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Hfm1D3Z4R1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Hfm1D3Z4R1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC30.38■■■□□ 2.45
Hfm1D3Z4R1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC30.37■■■□□ 2.45
Hfm1D3Z4R1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC30.37■■■□□ 2.45
Hfm1D3Z4R1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Hfm1D3Z4R1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Hfm1D3Z4R1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Hfm1D3Z4R1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Hfm1D3Z4R1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
Hfm1D3Z4R1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Hfm1D3Z4R1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC30.35■■■□□ 2.45
Hfm1D3Z4R1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC30.35■■■□□ 2.45
Hfm1D3Z4R1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
Hfm1D3Z4R1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Hfm1D3Z4R1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Hfm1D3Z4R1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Hfm1D3Z4R1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Hfm1D3Z4R1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Hfm1D3Z4R1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Hfm1D3Z4R1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Hfm1D3Z4R1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Hfm1D3Z4R1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Hfm1D3Z4R1 Gm43173-201ENSMUST00000202246 593 ntBASIC30.33■■■□□ 2.45
Hfm1D3Z4R1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Hfm1D3Z4R1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC30.33■■■□□ 2.45
Hfm1D3Z4R1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Hfm1D3Z4R1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC30.32■■■□□ 2.44
Hfm1D3Z4R1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Hfm1D3Z4R1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Hfm1D3Z4R1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Hfm1D3Z4R1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Hfm1D3Z4R1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Hfm1D3Z4R1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Hfm1D3Z4R1 Gm8493-201ENSMUST00000196881 489 ntBASIC30.3■■■□□ 2.44
Hfm1D3Z4R1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Hfm1D3Z4R1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Hfm1D3Z4R1 Gm5874-201ENSMUST00000096101 508 ntBASIC30.3■■■□□ 2.44
Hfm1D3Z4R1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
Hfm1D3Z4R1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Hfm1D3Z4R1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Hfm1D3Z4R1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
Hfm1D3Z4R1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC30.29■■■□□ 2.44
Hfm1D3Z4R1 Gm10657-201ENSMUST00000193528 1031 ntBASIC30.29■■■□□ 2.44
Hfm1D3Z4R1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Hfm1D3Z4R1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Hfm1D3Z4R1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Hfm1D3Z4R1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Hfm1D3Z4R1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC30.28■■■□□ 2.44
Hfm1D3Z4R1 Wdr70-203ENSMUST00000227371 1130 ntBASIC30.28■■■□□ 2.44
Hfm1D3Z4R1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Hfm1D3Z4R1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Hfm1D3Z4R1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Hfm1D3Z4R1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Hfm1D3Z4R1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Hfm1D3Z4R1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC30.27■■■□□ 2.44
Hfm1D3Z4R1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Hfm1D3Z4R1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC30.27■■■□□ 2.44
Hfm1D3Z4R1 Gm12251-201ENSMUST00000117893 792 ntBASIC30.27■■■□□ 2.44
Hfm1D3Z4R1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Hfm1D3Z4R1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Hfm1D3Z4R1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
Hfm1D3Z4R1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Hfm1D3Z4R1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Hfm1D3Z4R1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC30.26■■■□□ 2.44
Hfm1D3Z4R1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Hfm1D3Z4R1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Hfm1D3Z4R1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Hfm1D3Z4R1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Hfm1D3Z4R1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Hfm1D3Z4R1 Gm8770-201ENSMUST00000121113 1109 ntBASIC30.25■■■□□ 2.43
Hfm1D3Z4R1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC30.25■■■□□ 2.43
Hfm1D3Z4R1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Hfm1D3Z4R1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Hfm1D3Z4R1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Hfm1D3Z4R1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
Hfm1D3Z4R1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Hfm1D3Z4R1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Hfm1D3Z4R1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Hfm1D3Z4R1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Hfm1D3Z4R1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Hfm1D3Z4R1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC30.22■■■□□ 2.43
Hfm1D3Z4R1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
Hfm1D3Z4R1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Hfm1D3Z4R1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Hfm1D3Z4R1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Hfm1D3Z4R1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Hfm1D3Z4R1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC30.21■■■□□ 2.43
Hfm1D3Z4R1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC30.21■■■□□ 2.43
Hfm1D3Z4R1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC30.21■■■□□ 2.43
Hfm1D3Z4R1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Hfm1D3Z4R1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Hfm1D3Z4R1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC30.2■■■□□ 2.42
Hfm1D3Z4R1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
Hfm1D3Z4R1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC30.19■■■□□ 2.42
Hfm1D3Z4R1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Hfm1D3Z4R1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC30.18■■■□□ 2.42
Hfm1D3Z4R1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Hfm1D3Z4R1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC30.18■■■□□ 2.42
Hfm1D3Z4R1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms