Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Gm28729A0A1B0GSW2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28729A0A1B0GSW2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28729A0A1B0GSW2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Gm28729A0A1B0GSW2 Gm12821-201ENSMUST00000120022 600 ntBASIC20.78■□□□□ 0.92
Gm28729A0A1B0GSW2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.78■□□□□ 0.92
Gm28729A0A1B0GSW2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28729A0A1B0GSW2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28729A0A1B0GSW2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28729A0A1B0GSW2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28729A0A1B0GSW2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28729A0A1B0GSW2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28729A0A1B0GSW2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28729A0A1B0GSW2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm28729A0A1B0GSW2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Gm28729A0A1B0GSW2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.77■□□□□ 0.92
Gm28729A0A1B0GSW2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.77■□□□□ 0.92
Gm28729A0A1B0GSW2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm28729A0A1B0GSW2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gm28729A0A1B0GSW2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gm28729A0A1B0GSW2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm28729A0A1B0GSW2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm28729A0A1B0GSW2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm28729A0A1B0GSW2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gm28729A0A1B0GSW2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.76■□□□□ 0.91
Gm28729A0A1B0GSW2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.76■□□□□ 0.91
Gm28729A0A1B0GSW2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm28729A0A1B0GSW2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.75■□□□□ 0.91
Gm28729A0A1B0GSW2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gm28729A0A1B0GSW2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gm28729A0A1B0GSW2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gm28729A0A1B0GSW2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gm28729A0A1B0GSW2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Gm28729A0A1B0GSW2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm28729A0A1B0GSW2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm28729A0A1B0GSW2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.74■□□□□ 0.91
Gm28729A0A1B0GSW2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.74■□□□□ 0.91
Gm28729A0A1B0GSW2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm28729A0A1B0GSW2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gm28729A0A1B0GSW2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm28729A0A1B0GSW2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm28729A0A1B0GSW2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm28729A0A1B0GSW2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm28729A0A1B0GSW2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Gm28729A0A1B0GSW2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm28729A0A1B0GSW2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28729A0A1B0GSW2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28729A0A1B0GSW2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Gm28729A0A1B0GSW2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.72■□□□□ 0.91
Gm28729A0A1B0GSW2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28729A0A1B0GSW2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28729A0A1B0GSW2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28729A0A1B0GSW2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28729A0A1B0GSW2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28729A0A1B0GSW2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28729A0A1B0GSW2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28729A0A1B0GSW2 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.71■□□□□ 0.91
Gm28729A0A1B0GSW2 Serp2-204ENSMUST00000228055 705 ntBASIC20.71■□□□□ 0.91
Gm28729A0A1B0GSW2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28729A0A1B0GSW2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28729A0A1B0GSW2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28729A0A1B0GSW2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28729A0A1B0GSW2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28729A0A1B0GSW2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28729A0A1B0GSW2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.7■□□□□ 0.9
Gm28729A0A1B0GSW2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.69■□□□□ 0.9
Gm28729A0A1B0GSW2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28729A0A1B0GSW2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28729A0A1B0GSW2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.69■□□□□ 0.9
Gm28729A0A1B0GSW2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28729A0A1B0GSW2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28729A0A1B0GSW2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28729A0A1B0GSW2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.68■□□□□ 0.9
Gm28729A0A1B0GSW2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.68■□□□□ 0.9
Gm28729A0A1B0GSW2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28729A0A1B0GSW2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28729A0A1B0GSW2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28729A0A1B0GSW2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28729A0A1B0GSW2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Gm28729A0A1B0GSW2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Gm28729A0A1B0GSW2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28729A0A1B0GSW2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Gm28729A0A1B0GSW2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.67■□□□□ 0.9
Gm28729A0A1B0GSW2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28729A0A1B0GSW2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.67■□□□□ 0.9
Gm28729A0A1B0GSW2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28729A0A1B0GSW2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm28729A0A1B0GSW2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gm28729A0A1B0GSW2 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.66■□□□□ 0.9
Gm28729A0A1B0GSW2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm28729A0A1B0GSW2 Gm9870-201ENSMUST00000063874 645 ntBASIC20.66■□□□□ 0.9
Gm28729A0A1B0GSW2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm28729A0A1B0GSW2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Gm28729A0A1B0GSW2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Gm28729A0A1B0GSW2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.65■□□□□ 0.9
Gm28729A0A1B0GSW2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28729A0A1B0GSW2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28729A0A1B0GSW2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28729A0A1B0GSW2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28729A0A1B0GSW2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms