Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.27■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.25■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Trav9n-2A0A0G2JDP3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Gm42418-201ENSMUST00000182010 1831 ntBASIC15.24■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9n-2A0A0G2JDP3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15.24■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Gm37415-201ENSMUST00000192265 2054 ntBASIC15.24■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9n-2A0A0G2JDP3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9n-2A0A0G2JDP3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.23■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9n-2A0A0G2JDP3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Gm13042-201ENSMUST00000119244 1955 ntBASIC15.22■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9n-2A0A0G2JDP3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC15.19■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.19■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Trav9n-2A0A0G2JDP3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9n-2A0A0G2JDP3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 132.1 ms