Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Trbv30A0A0B4J1P1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.83■□□□□ 0.12
Trbv30A0A0B4J1P1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trbv30A0A0B4J1P1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trbv30A0A0B4J1P1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv30A0A0B4J1P1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv30A0A0B4J1P1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv30A0A0B4J1P1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv30A0A0B4J1P1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv30A0A0B4J1P1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv30A0A0B4J1P1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv30A0A0B4J1P1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv30A0A0B4J1P1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv30A0A0B4J1P1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv30A0A0B4J1P1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv30A0A0B4J1P1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv30A0A0B4J1P1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv30A0A0B4J1P1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv30A0A0B4J1P1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv30A0A0B4J1P1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv30A0A0B4J1P1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv30A0A0B4J1P1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trbv30A0A0B4J1P1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv30A0A0B4J1P1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv30A0A0B4J1P1 Gm10232-201ENSMUST00000089221 720 ntBASIC15.81■□□□□ 0.12
Trbv30A0A0B4J1P1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.81■□□□□ 0.12
Trbv30A0A0B4J1P1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv30A0A0B4J1P1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv30A0A0B4J1P1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC15.8■□□□□ 0.12
Trbv30A0A0B4J1P1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv30A0A0B4J1P1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC15.8■□□□□ 0.12
Trbv30A0A0B4J1P1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv30A0A0B4J1P1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv30A0A0B4J1P1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trbv30A0A0B4J1P1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trbv30A0A0B4J1P1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trbv30A0A0B4J1P1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv30A0A0B4J1P1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv30A0A0B4J1P1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv30A0A0B4J1P1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv30A0A0B4J1P1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv30A0A0B4J1P1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv30A0A0B4J1P1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv30A0A0B4J1P1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv30A0A0B4J1P1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Trbv30A0A0B4J1P1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv30A0A0B4J1P1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv30A0A0B4J1P1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.79■□□□□ 0.12
Trbv30A0A0B4J1P1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv30A0A0B4J1P1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC15.79■□□□□ 0.12
Trbv30A0A0B4J1P1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv30A0A0B4J1P1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trbv30A0A0B4J1P1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv30A0A0B4J1P1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv30A0A0B4J1P1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.79■□□□□ 0.12
Trbv30A0A0B4J1P1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Trbv30A0A0B4J1P1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv30A0A0B4J1P1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv30A0A0B4J1P1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trbv30A0A0B4J1P1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trbv30A0A0B4J1P1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trbv30A0A0B4J1P1 Gm5812-201ENSMUST00000061073 957 ntBASIC15.78■□□□□ 0.12
Trbv30A0A0B4J1P1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv30A0A0B4J1P1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Trbv30A0A0B4J1P1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.77■□□□□ 0.12
Trbv30A0A0B4J1P1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.77■□□□□ 0.12
Trbv30A0A0B4J1P1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
Trbv30A0A0B4J1P1 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.77■□□□□ 0.11
Trbv30A0A0B4J1P1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC15.76■□□□□ 0.11
Trbv30A0A0B4J1P1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv30A0A0B4J1P1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC15.76■□□□□ 0.11
Trbv30A0A0B4J1P1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv30A0A0B4J1P1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv30A0A0B4J1P1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv30A0A0B4J1P1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trbv30A0A0B4J1P1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv30A0A0B4J1P1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.76■□□□□ 0.11
Trbv30A0A0B4J1P1 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.76■□□□□ 0.11
Trbv30A0A0B4J1P1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv30A0A0B4J1P1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv30A0A0B4J1P1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv30A0A0B4J1P1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.75■□□□□ 0.11
Trbv30A0A0B4J1P1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv30A0A0B4J1P1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv30A0A0B4J1P1 Gm15820-201ENSMUST00000201566 728 ntBASIC15.75■□□□□ 0.11
Trbv30A0A0B4J1P1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trbv30A0A0B4J1P1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC15.75■□□□□ 0.11
Trbv30A0A0B4J1P1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.75■□□□□ 0.11
Trbv30A0A0B4J1P1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv30A0A0B4J1P1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv30A0A0B4J1P1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv30A0A0B4J1P1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trbv30A0A0B4J1P1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Trbv30A0A0B4J1P1 Gm15546-201ENSMUST00000122095 826 ntBASIC15.74■□□□□ 0.11
Trbv30A0A0B4J1P1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.74■□□□□ 0.11
Trbv30A0A0B4J1P1 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.74■□□□□ 0.11
Trbv30A0A0B4J1P1 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.74■□□□□ 0.11
Trbv30A0A0B4J1P1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv30A0A0B4J1P1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv30A0A0B4J1P1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 127.7 ms