Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC15.74■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.74■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.73■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.73■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.73■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.73■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.72■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.7■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.68■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC15.67■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Gm30023-201ENSMUST00000197970 889 ntBASIC15.66■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Gm16148-201ENSMUST00000119653 893 ntBASIC15.65■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Tcrg-V4A0A0B4J1J8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.64■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 151.9 ms