Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trbv23A0A0A6YWQ1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv23A0A0A6YWQ1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv23A0A0A6YWQ1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv23A0A0A6YWQ1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv23A0A0A6YWQ1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv23A0A0A6YWQ1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.99■□□□□ 0.47
Trbv23A0A0A6YWQ1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Trbv23A0A0A6YWQ1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trbv23A0A0A6YWQ1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv23A0A0A6YWQ1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv23A0A0A6YWQ1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv23A0A0A6YWQ1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv23A0A0A6YWQ1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv23A0A0A6YWQ1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv23A0A0A6YWQ1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.98■□□□□ 0.47
Trbv23A0A0A6YWQ1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv23A0A0A6YWQ1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv23A0A0A6YWQ1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv23A0A0A6YWQ1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv23A0A0A6YWQ1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv23A0A0A6YWQ1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv23A0A0A6YWQ1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv23A0A0A6YWQ1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv23A0A0A6YWQ1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv23A0A0A6YWQ1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv23A0A0A6YWQ1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv23A0A0A6YWQ1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.97■□□□□ 0.47
Trbv23A0A0A6YWQ1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv23A0A0A6YWQ1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.97■□□□□ 0.47
Trbv23A0A0A6YWQ1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv23A0A0A6YWQ1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv23A0A0A6YWQ1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv23A0A0A6YWQ1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv23A0A0A6YWQ1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.96■□□□□ 0.47
Trbv23A0A0A6YWQ1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trbv23A0A0A6YWQ1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv23A0A0A6YWQ1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv23A0A0A6YWQ1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trbv23A0A0A6YWQ1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Trbv23A0A0A6YWQ1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Trbv23A0A0A6YWQ1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv23A0A0A6YWQ1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trbv23A0A0A6YWQ1 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.95■□□□□ 0.46
Trbv23A0A0A6YWQ1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.95■□□□□ 0.46
Trbv23A0A0A6YWQ1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.95■□□□□ 0.46
Trbv23A0A0A6YWQ1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Trbv23A0A0A6YWQ1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trbv23A0A0A6YWQ1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv23A0A0A6YWQ1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv23A0A0A6YWQ1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv23A0A0A6YWQ1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv23A0A0A6YWQ1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trbv23A0A0A6YWQ1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv23A0A0A6YWQ1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv23A0A0A6YWQ1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv23A0A0A6YWQ1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.94■□□□□ 0.46
Trbv23A0A0A6YWQ1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv23A0A0A6YWQ1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv23A0A0A6YWQ1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv23A0A0A6YWQ1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv23A0A0A6YWQ1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv23A0A0A6YWQ1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trbv23A0A0A6YWQ1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv23A0A0A6YWQ1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Trbv23A0A0A6YWQ1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv23A0A0A6YWQ1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv23A0A0A6YWQ1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.92■□□□□ 0.46
Trbv23A0A0A6YWQ1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.92■□□□□ 0.46
Trbv23A0A0A6YWQ1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.92■□□□□ 0.46
Trbv23A0A0A6YWQ1 Golph3-202ENSMUST00000226517 2359 ntBASIC17.92■□□□□ 0.46
Trbv23A0A0A6YWQ1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.92■□□□□ 0.46
Trbv23A0A0A6YWQ1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv23A0A0A6YWQ1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv23A0A0A6YWQ1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv23A0A0A6YWQ1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trbv23A0A0A6YWQ1 Gm44428-201ENSMUST00000204474 874 ntBASIC17.91■□□□□ 0.46
Trbv23A0A0A6YWQ1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv23A0A0A6YWQ1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv23A0A0A6YWQ1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trbv23A0A0A6YWQ1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv23A0A0A6YWQ1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv23A0A0A6YWQ1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv23A0A0A6YWQ1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv23A0A0A6YWQ1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.9■□□□□ 0.46
Trbv23A0A0A6YWQ1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv23A0A0A6YWQ1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
Trbv23A0A0A6YWQ1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv23A0A0A6YWQ1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trbv23A0A0A6YWQ1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv23A0A0A6YWQ1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Trbv23A0A0A6YWQ1 Mir6538-201ENSMUST00000183713 110 ntBASIC17.89■□□□□ 0.45
Trbv23A0A0A6YWQ1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv23A0A0A6YWQ1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv23A0A0A6YWQ1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Trbv23A0A0A6YWQ1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.89■□□□□ 0.45
Trbv23A0A0A6YWQ1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv23A0A0A6YWQ1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trbv23A0A0A6YWQ1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv23A0A0A6YWQ1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms