Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav10A0A075B642 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav10A0A075B642 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav10A0A075B642 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Trav10A0A075B642 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav10A0A075B642 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav10A0A075B642 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.66■□□□□ 0.58
Trav10A0A075B642 Gm5921-201ENSMUST00000075898 882 ntBASIC18.66■□□□□ 0.58
Trav10A0A075B642 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav10A0A075B642 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav10A0A075B642 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trav10A0A075B642 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav10A0A075B642 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav10A0A075B642 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav10A0A075B642 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav10A0A075B642 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.65■□□□□ 0.58
Trav10A0A075B642 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav10A0A075B642 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav10A0A075B642 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.65■□□□□ 0.58
Trav10A0A075B642 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav10A0A075B642 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trav10A0A075B642 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.64■□□□□ 0.58
Trav10A0A075B642 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav10A0A075B642 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trav10A0A075B642 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trav10A0A075B642 Gm45444-201ENSMUST00000211394 898 ntBASIC18.64■□□□□ 0.57
Trav10A0A075B642 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Trav10A0A075B642 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trav10A0A075B642 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Trav10A0A075B642 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trav10A0A075B642 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav10A0A075B642 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav10A0A075B642 Gm13238-201ENSMUST00000117655 780 ntBASIC18.63■□□□□ 0.57
Trav10A0A075B642 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav10A0A075B642 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav10A0A075B642 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav10A0A075B642 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav10A0A075B642 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.63■□□□□ 0.57
Trav10A0A075B642 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.62■□□□□ 0.57
Trav10A0A075B642 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav10A0A075B642 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav10A0A075B642 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav10A0A075B642 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav10A0A075B642 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav10A0A075B642 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav10A0A075B642 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav10A0A075B642 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav10A0A075B642 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav10A0A075B642 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav10A0A075B642 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav10A0A075B642 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav10A0A075B642 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav10A0A075B642 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav10A0A075B642 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav10A0A075B642 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.6■□□□□ 0.57
Trav10A0A075B642 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav10A0A075B642 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Trav10A0A075B642 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Trav10A0A075B642 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav10A0A075B642 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav10A0A075B642 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav10A0A075B642 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.59■□□□□ 0.57
Trav10A0A075B642 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav10A0A075B642 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav10A0A075B642 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.59■□□□□ 0.57
Trav10A0A075B642 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Trav10A0A075B642 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav10A0A075B642 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.59■□□□□ 0.57
Trav10A0A075B642 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.59■□□□□ 0.57
Trav10A0A075B642 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav10A0A075B642 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
Trav10A0A075B642 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Trav10A0A075B642 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav10A0A075B642 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.58■□□□□ 0.56
Trav10A0A075B642 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.58■□□□□ 0.56
Trav10A0A075B642 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.58■□□□□ 0.56
Trav10A0A075B642 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Trav10A0A075B642 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav10A0A075B642 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav10A0A075B642 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trav10A0A075B642 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav10A0A075B642 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.57■□□□□ 0.56
Trav10A0A075B642 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav10A0A075B642 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav10A0A075B642 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav10A0A075B642 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav10A0A075B642 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trav10A0A075B642 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav10A0A075B642 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav10A0A075B642 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav10A0A075B642 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Trav10A0A075B642 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trav10A0A075B642 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav10A0A075B642 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trav10A0A075B642 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav10A0A075B642 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav10A0A075B642 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trav10A0A075B642 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav10A0A075B642 Gm43566-201ENSMUST00000196851 808 ntBASIC18.55■□□□□ 0.56
Trav10A0A075B642 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms