Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-1A0A075B5Z8 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.93■□□□□ 0.3
Trav6-1A0A075B5Z8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-1A0A075B5Z8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-1A0A075B5Z8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-1A0A075B5Z8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-1A0A075B5Z8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-1A0A075B5Z8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-1A0A075B5Z8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-1A0A075B5Z8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-1A0A075B5Z8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-1A0A075B5Z8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trav6-1A0A075B5Z8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-1A0A075B5Z8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav6-1A0A075B5Z8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Trav6-1A0A075B5Z8 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.91■□□□□ 0.3
Trav6-1A0A075B5Z8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-1A0A075B5Z8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-1A0A075B5Z8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-1A0A075B5Z8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-1A0A075B5Z8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav6-1A0A075B5Z8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-1A0A075B5Z8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trav6-1A0A075B5Z8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trav6-1A0A075B5Z8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-1A0A075B5Z8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-1A0A075B5Z8 Gm6311-201ENSMUST00000073790 878 ntBASIC16.9■□□□□ 0.3
Trav6-1A0A075B5Z8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav6-1A0A075B5Z8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav6-1A0A075B5Z8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-1A0A075B5Z8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-1A0A075B5Z8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-1A0A075B5Z8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.89■□□□□ 0.29
Trav6-1A0A075B5Z8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.89■□□□□ 0.29
Trav6-1A0A075B5Z8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-1A0A075B5Z8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-1A0A075B5Z8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-1A0A075B5Z8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC16.88■□□□□ 0.29
Trav6-1A0A075B5Z8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-1A0A075B5Z8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-1A0A075B5Z8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav6-1A0A075B5Z8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-1A0A075B5Z8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.88■□□□□ 0.29
Trav6-1A0A075B5Z8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trav6-1A0A075B5Z8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Trav6-1A0A075B5Z8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Trav6-1A0A075B5Z8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-1A0A075B5Z8 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.88■□□□□ 0.29
Trav6-1A0A075B5Z8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-1A0A075B5Z8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-1A0A075B5Z8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-1A0A075B5Z8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Trav6-1A0A075B5Z8 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.87■□□□□ 0.29
Trav6-1A0A075B5Z8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-1A0A075B5Z8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-1A0A075B5Z8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav6-1A0A075B5Z8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-1A0A075B5Z8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-1A0A075B5Z8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Trav6-1A0A075B5Z8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-1A0A075B5Z8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-1A0A075B5Z8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-1A0A075B5Z8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-1A0A075B5Z8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-1A0A075B5Z8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav6-1A0A075B5Z8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-1A0A075B5Z8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-1A0A075B5Z8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trav6-1A0A075B5Z8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-1A0A075B5Z8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-1A0A075B5Z8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-1A0A075B5Z8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.85■□□□□ 0.29
Trav6-1A0A075B5Z8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-1A0A075B5Z8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-1A0A075B5Z8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-1A0A075B5Z8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trav6-1A0A075B5Z8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-1A0A075B5Z8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-1A0A075B5Z8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-1A0A075B5Z8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-1A0A075B5Z8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Trav6-1A0A075B5Z8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trav6-1A0A075B5Z8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.84■□□□□ 0.29
Trav6-1A0A075B5Z8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-1A0A075B5Z8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.84■□□□□ 0.29
Trav6-1A0A075B5Z8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-1A0A075B5Z8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-1A0A075B5Z8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-1A0A075B5Z8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trav6-1A0A075B5Z8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trav6-1A0A075B5Z8 Gm9806-201ENSMUST00000051080 552 ntBASIC16.83■□□□□ 0.28
Trav6-1A0A075B5Z8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-1A0A075B5Z8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
Trav6-1A0A075B5Z8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-1A0A075B5Z8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-1A0A075B5Z8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trav6-1A0A075B5Z8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-1A0A075B5Z8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-1A0A075B5Z8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-1A0A075B5Z8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms