Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.15■□□□□ 0.5
Trav5-1A0A075B5Z7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav5-1A0A075B5Z7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav5-1A0A075B5Z7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav5-1A0A075B5Z7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trav5-1A0A075B5Z7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav5-1A0A075B5Z7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.14■□□□□ 0.49
Trav5-1A0A075B5Z7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trav5-1A0A075B5Z7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Trav5-1A0A075B5Z7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav5-1A0A075B5Z7 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav5-1A0A075B5Z7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav5-1A0A075B5Z7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav5-1A0A075B5Z7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav5-1A0A075B5Z7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav5-1A0A075B5Z7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav5-1A0A075B5Z7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.12■□□□□ 0.49
Trav5-1A0A075B5Z7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav5-1A0A075B5Z7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav5-1A0A075B5Z7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.12■□□□□ 0.49
Trav5-1A0A075B5Z7 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.12■□□□□ 0.49
Trav5-1A0A075B5Z7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav5-1A0A075B5Z7 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav5-1A0A075B5Z7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trav5-1A0A075B5Z7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.11■□□□□ 0.49
Trav5-1A0A075B5Z7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav5-1A0A075B5Z7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trav5-1A0A075B5Z7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav5-1A0A075B5Z7 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav5-1A0A075B5Z7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav5-1A0A075B5Z7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav5-1A0A075B5Z7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav5-1A0A075B5Z7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav5-1A0A075B5Z7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav5-1A0A075B5Z7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trav5-1A0A075B5Z7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav5-1A0A075B5Z7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Trav5-1A0A075B5Z7 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav5-1A0A075B5Z7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav5-1A0A075B5Z7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav5-1A0A075B5Z7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav5-1A0A075B5Z7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav5-1A0A075B5Z7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trav5-1A0A075B5Z7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav5-1A0A075B5Z7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav5-1A0A075B5Z7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav5-1A0A075B5Z7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav5-1A0A075B5Z7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav5-1A0A075B5Z7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trav5-1A0A075B5Z7 Gm22238-201ENSMUST00000175222 88 ntBASIC18.08■□□□□ 0.48
Trav5-1A0A075B5Z7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav5-1A0A075B5Z7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Trav5-1A0A075B5Z7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav5-1A0A075B5Z7 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav5-1A0A075B5Z7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav5-1A0A075B5Z7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav5-1A0A075B5Z7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Trav5-1A0A075B5Z7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav5-1A0A075B5Z7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav5-1A0A075B5Z7 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav5-1A0A075B5Z7 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav5-1A0A075B5Z7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav5-1A0A075B5Z7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav5-1A0A075B5Z7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav5-1A0A075B5Z7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav5-1A0A075B5Z7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.07■□□□□ 0.48
Trav5-1A0A075B5Z7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.07■□□□□ 0.48
Trav5-1A0A075B5Z7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.07■□□□□ 0.48
Trav5-1A0A075B5Z7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav5-1A0A075B5Z7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.06■□□□□ 0.48
Trav5-1A0A075B5Z7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.06■□□□□ 0.48
Trav5-1A0A075B5Z7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trav5-1A0A075B5Z7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trav5-1A0A075B5Z7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav5-1A0A075B5Z7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trav5-1A0A075B5Z7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav5-1A0A075B5Z7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Trav5-1A0A075B5Z7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
Trav5-1A0A075B5Z7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav5-1A0A075B5Z7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav5-1A0A075B5Z7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trav5-1A0A075B5Z7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav5-1A0A075B5Z7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav5-1A0A075B5Z7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav5-1A0A075B5Z7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav5-1A0A075B5Z7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
Trav5-1A0A075B5Z7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav5-1A0A075B5Z7 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.04■□□□□ 0.48
Trav5-1A0A075B5Z7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav5-1A0A075B5Z7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav5-1A0A075B5Z7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav5-1A0A075B5Z7 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav5-1A0A075B5Z7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav5-1A0A075B5Z7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav5-1A0A075B5Z7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.03■□□□□ 0.48
Trav5-1A0A075B5Z7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav5-1A0A075B5Z7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav5-1A0A075B5Z7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav5-1A0A075B5Z7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trav5-1A0A075B5Z7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms