Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
H2afb1S4R1E0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb1S4R1E0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb1S4R1E0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb1S4R1E0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb1S4R1E0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb1S4R1E0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb1S4R1E0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb1S4R1E0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
H2afb1S4R1E0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.08■□□□□ 0.65
H2afb1S4R1E0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
H2afb1S4R1E0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
H2afb1S4R1E0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
H2afb1S4R1E0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
H2afb1S4R1E0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
H2afb1S4R1E0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
H2afb1S4R1E0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
H2afb1S4R1E0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
H2afb1S4R1E0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
H2afb1S4R1E0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
H2afb1S4R1E0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.07■□□□□ 0.64
H2afb1S4R1E0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
H2afb1S4R1E0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
H2afb1S4R1E0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb1S4R1E0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb1S4R1E0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb1S4R1E0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb1S4R1E0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb1S4R1E0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb1S4R1E0 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.06■□□□□ 0.64
H2afb1S4R1E0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb1S4R1E0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
H2afb1S4R1E0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
H2afb1S4R1E0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
H2afb1S4R1E0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
H2afb1S4R1E0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
H2afb1S4R1E0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
H2afb1S4R1E0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb1S4R1E0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb1S4R1E0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
H2afb1S4R1E0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
H2afb1S4R1E0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.04■□□□□ 0.64
H2afb1S4R1E0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb1S4R1E0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb1S4R1E0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
H2afb1S4R1E0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
H2afb1S4R1E0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
H2afb1S4R1E0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
H2afb1S4R1E0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
H2afb1S4R1E0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.02■□□□□ 0.64
H2afb1S4R1E0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
H2afb1S4R1E0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
H2afb1S4R1E0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
H2afb1S4R1E0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
H2afb1S4R1E0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
H2afb1S4R1E0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
H2afb1S4R1E0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
H2afb1S4R1E0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
H2afb1S4R1E0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
H2afb1S4R1E0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
H2afb1S4R1E0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
H2afb1S4R1E0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
H2afb1S4R1E0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
H2afb1S4R1E0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
H2afb1S4R1E0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
H2afb1S4R1E0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
H2afb1S4R1E0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
H2afb1S4R1E0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
H2afb1S4R1E0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
H2afb1S4R1E0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
H2afb1S4R1E0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.01■□□□□ 0.63
H2afb1S4R1E0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
H2afb1S4R1E0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
H2afb1S4R1E0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
H2afb1S4R1E0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
H2afb1S4R1E0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19■□□□□ 0.63
H2afb1S4R1E0 AC151971.4-201ENSMUST00000214717 704 ntBASIC19■□□□□ 0.63
H2afb1S4R1E0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
H2afb1S4R1E0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.99■□□□□ 0.63
H2afb1S4R1E0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
H2afb1S4R1E0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
H2afb1S4R1E0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
H2afb1S4R1E0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb1S4R1E0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb1S4R1E0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb1S4R1E0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
H2afb1S4R1E0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb1S4R1E0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb1S4R1E0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb1S4R1E0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
H2afb1S4R1E0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb1S4R1E0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
H2afb1S4R1E0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.97■□□□□ 0.63
H2afb1S4R1E0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
H2afb1S4R1E0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H2afb1S4R1E0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
H2afb1S4R1E0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
H2afb1S4R1E0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H2afb1S4R1E0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
H2afb1S4R1E0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms