Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ube4bQ9ES00 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ube4bQ9ES00 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ube4bQ9ES00 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ube4bQ9ES00 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ube4bQ9ES00 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ube4bQ9ES00 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ube4bQ9ES00 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ube4bQ9ES00 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ube4bQ9ES00 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ube4bQ9ES00 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ube4bQ9ES00 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ube4bQ9ES00 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ube4bQ9ES00 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.18■□□□□ 0.82
Ube4bQ9ES00 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ube4bQ9ES00 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ube4bQ9ES00 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ube4bQ9ES00 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ube4bQ9ES00 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ube4bQ9ES00 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.17■□□□□ 0.82
Ube4bQ9ES00 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ube4bQ9ES00 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ube4bQ9ES00 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ube4bQ9ES00 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.17■□□□□ 0.82
Ube4bQ9ES00 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ube4bQ9ES00 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ube4bQ9ES00 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ube4bQ9ES00 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ube4bQ9ES00 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ube4bQ9ES00 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ube4bQ9ES00 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ube4bQ9ES00 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ube4bQ9ES00 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ube4bQ9ES00 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ube4bQ9ES00 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.16■□□□□ 0.82
Ube4bQ9ES00 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ube4bQ9ES00 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ube4bQ9ES00 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ube4bQ9ES00 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.15■□□□□ 0.82
Ube4bQ9ES00 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ube4bQ9ES00 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ube4bQ9ES00 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ube4bQ9ES00 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ube4bQ9ES00 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ube4bQ9ES00 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ube4bQ9ES00 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ube4bQ9ES00 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ube4bQ9ES00 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ube4bQ9ES00 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ube4bQ9ES00 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.13■□□□□ 0.81
Ube4bQ9ES00 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.13■□□□□ 0.81
Ube4bQ9ES00 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Ube4bQ9ES00 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ube4bQ9ES00 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ube4bQ9ES00 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ube4bQ9ES00 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ube4bQ9ES00 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ube4bQ9ES00 Gm22567-201ENSMUST00000175542 342 ntBASIC20.12■□□□□ 0.81
Ube4bQ9ES00 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ube4bQ9ES00 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.12■□□□□ 0.81
Ube4bQ9ES00 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ube4bQ9ES00 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ube4bQ9ES00 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ube4bQ9ES00 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ube4bQ9ES00 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.1■□□□□ 0.81
Ube4bQ9ES00 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ube4bQ9ES00 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ube4bQ9ES00 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.1■□□□□ 0.81
Ube4bQ9ES00 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ube4bQ9ES00 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.1■□□□□ 0.81
Ube4bQ9ES00 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.1■□□□□ 0.81
Ube4bQ9ES00 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ube4bQ9ES00 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ube4bQ9ES00 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ube4bQ9ES00 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ube4bQ9ES00 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ube4bQ9ES00 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ube4bQ9ES00 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ube4bQ9ES00 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Ube4bQ9ES00 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ube4bQ9ES00 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ube4bQ9ES00 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Ube4bQ9ES00 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ube4bQ9ES00 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ube4bQ9ES00 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.09■□□□□ 0.81
Ube4bQ9ES00 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ube4bQ9ES00 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ube4bQ9ES00 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Ube4bQ9ES00 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ube4bQ9ES00 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Ube4bQ9ES00 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ube4bQ9ES00 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ube4bQ9ES00 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.08■□□□□ 0.8
Ube4bQ9ES00 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Ube4bQ9ES00 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ube4bQ9ES00 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ube4bQ9ES00 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ube4bQ9ES00 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ube4bQ9ES00 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ube4bQ9ES00 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms