Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hmg20aQ9DC33 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmg20aQ9DC33 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmg20aQ9DC33 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmg20aQ9DC33 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmg20aQ9DC33 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Hmg20aQ9DC33 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmg20aQ9DC33 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmg20aQ9DC33 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmg20aQ9DC33 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hmg20aQ9DC33 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Hmg20aQ9DC33 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmg20aQ9DC33 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmg20aQ9DC33 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hmg20aQ9DC33 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmg20aQ9DC33 Golph3-202ENSMUST00000226517 2359 ntBASIC19.24■□□□□ 0.67
Hmg20aQ9DC33 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmg20aQ9DC33 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmg20aQ9DC33 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmg20aQ9DC33 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hmg20aQ9DC33 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hmg20aQ9DC33 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hmg20aQ9DC33 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hmg20aQ9DC33 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.23■□□□□ 0.67
Hmg20aQ9DC33 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmg20aQ9DC33 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmg20aQ9DC33 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmg20aQ9DC33 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.22■□□□□ 0.67
Hmg20aQ9DC33 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmg20aQ9DC33 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmg20aQ9DC33 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmg20aQ9DC33 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmg20aQ9DC33 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmg20aQ9DC33 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hmg20aQ9DC33 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hmg20aQ9DC33 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hmg20aQ9DC33 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Hmg20aQ9DC33 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.21■□□□□ 0.67
Hmg20aQ9DC33 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmg20aQ9DC33 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Hmg20aQ9DC33 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hmg20aQ9DC33 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmg20aQ9DC33 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.2■□□□□ 0.66
Hmg20aQ9DC33 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Hmg20aQ9DC33 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Hmg20aQ9DC33 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmg20aQ9DC33 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmg20aQ9DC33 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.19■□□□□ 0.66
Hmg20aQ9DC33 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmg20aQ9DC33 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.19■□□□□ 0.66
Hmg20aQ9DC33 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.19■□□□□ 0.66
Hmg20aQ9DC33 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmg20aQ9DC33 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmg20aQ9DC33 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Hmg20aQ9DC33 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmg20aQ9DC33 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Hmg20aQ9DC33 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmg20aQ9DC33 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmg20aQ9DC33 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmg20aQ9DC33 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hmg20aQ9DC33 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Hmg20aQ9DC33 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Hmg20aQ9DC33 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmg20aQ9DC33 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmg20aQ9DC33 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20aQ9DC33 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20aQ9DC33 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20aQ9DC33 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.16■□□□□ 0.66
Hmg20aQ9DC33 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20aQ9DC33 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20aQ9DC33 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmg20aQ9DC33 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20aQ9DC33 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.15■□□□□ 0.66
Hmg20aQ9DC33 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20aQ9DC33 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Hmg20aQ9DC33 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20aQ9DC33 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmg20aQ9DC33 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.14■□□□□ 0.66
Hmg20aQ9DC33 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.66
Hmg20aQ9DC33 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Hmg20aQ9DC33 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmg20aQ9DC33 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmg20aQ9DC33 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmg20aQ9DC33 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Hmg20aQ9DC33 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Hmg20aQ9DC33 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.13■□□□□ 0.65
Hmg20aQ9DC33 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Hmg20aQ9DC33 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmg20aQ9DC33 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hmg20aQ9DC33 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmg20aQ9DC33 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmg20aQ9DC33 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmg20aQ9DC33 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Hmg20aQ9DC33 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmg20aQ9DC33 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Hmg20aQ9DC33 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmg20aQ9DC33 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmg20aQ9DC33 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmg20aQ9DC33 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hmg20aQ9DC33 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms