Protein–RNA interactions for Protein: Q9D842

Aplf, Aprataxin and PNK-like factor, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AplfQ9D842 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
AplfQ9D842 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
AplfQ9D842 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
AplfQ9D842 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.85■□□□□ 0.61
AplfQ9D842 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AplfQ9D842 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.85■□□□□ 0.61
AplfQ9D842 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.85■□□□□ 0.61
AplfQ9D842 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.85■□□□□ 0.61
AplfQ9D842 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
AplfQ9D842 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AplfQ9D842 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AplfQ9D842 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
AplfQ9D842 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AplfQ9D842 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
AplfQ9D842 Gm15820-201ENSMUST00000201566 728 ntBASIC18.84■□□□□ 0.61
AplfQ9D842 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AplfQ9D842 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AplfQ9D842 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AplfQ9D842 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
AplfQ9D842 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
AplfQ9D842 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
AplfQ9D842 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AplfQ9D842 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.83■□□□□ 0.6
AplfQ9D842 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
AplfQ9D842 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AplfQ9D842 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
AplfQ9D842 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AplfQ9D842 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AplfQ9D842 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
AplfQ9D842 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
AplfQ9D842 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.82■□□□□ 0.6
AplfQ9D842 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
AplfQ9D842 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AplfQ9D842 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
AplfQ9D842 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
AplfQ9D842 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AplfQ9D842 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
AplfQ9D842 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AplfQ9D842 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AplfQ9D842 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.81■□□□□ 0.6
AplfQ9D842 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
AplfQ9D842 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AplfQ9D842 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AplfQ9D842 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
AplfQ9D842 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AplfQ9D842 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
AplfQ9D842 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AplfQ9D842 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AplfQ9D842 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AplfQ9D842 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AplfQ9D842 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AplfQ9D842 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.8■□□□□ 0.6
AplfQ9D842 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
AplfQ9D842 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.8■□□□□ 0.6
AplfQ9D842 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AplfQ9D842 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AplfQ9D842 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
AplfQ9D842 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AplfQ9D842 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AplfQ9D842 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AplfQ9D842 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.79■□□□□ 0.6
AplfQ9D842 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.79■□□□□ 0.6
AplfQ9D842 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
AplfQ9D842 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AplfQ9D842 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AplfQ9D842 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
AplfQ9D842 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AplfQ9D842 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
AplfQ9D842 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.78■□□□□ 0.6
AplfQ9D842 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AplfQ9D842 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AplfQ9D842 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AplfQ9D842 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
AplfQ9D842 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
AplfQ9D842 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
AplfQ9D842 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
AplfQ9D842 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AplfQ9D842 Gm22567-201ENSMUST00000175542 342 ntBASIC18.77■□□□□ 0.6
AplfQ9D842 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AplfQ9D842 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
AplfQ9D842 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AplfQ9D842 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AplfQ9D842 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AplfQ9D842 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AplfQ9D842 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
AplfQ9D842 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
AplfQ9D842 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AplfQ9D842 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
AplfQ9D842 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AplfQ9D842 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
AplfQ9D842 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AplfQ9D842 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.75■□□□□ 0.59
AplfQ9D842 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
AplfQ9D842 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
AplfQ9D842 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
AplfQ9D842 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AplfQ9D842 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.74■□□□□ 0.59
AplfQ9D842 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
AplfQ9D842 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
AplfQ9D842 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms