Protein–RNA interactions for Protein: Q9D6J4

Necab3, N-terminal EF-hand calcium-binding protein 3, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Necab3Q9D6J4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Necab3Q9D6J4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Necab3Q9D6J4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.6■■□□□ 1.05
Necab3Q9D6J4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Necab3Q9D6J4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Necab3Q9D6J4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Necab3Q9D6J4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Necab3Q9D6J4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Necab3Q9D6J4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Necab3Q9D6J4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.59■■□□□ 1.05
Necab3Q9D6J4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.59■■□□□ 1.05
Necab3Q9D6J4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Necab3Q9D6J4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Necab3Q9D6J4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Necab3Q9D6J4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Necab3Q9D6J4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Necab3Q9D6J4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Necab3Q9D6J4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Necab3Q9D6J4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Necab3Q9D6J4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.58■■□□□ 1.05
Necab3Q9D6J4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.58■■□□□ 1.05
Necab3Q9D6J4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Necab3Q9D6J4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Necab3Q9D6J4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.58■■□□□ 1.05
Necab3Q9D6J4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Necab3Q9D6J4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Necab3Q9D6J4 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.57■■□□□ 1.04
Necab3Q9D6J4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Necab3Q9D6J4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Necab3Q9D6J4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Necab3Q9D6J4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Necab3Q9D6J4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.56■■□□□ 1.04
Necab3Q9D6J4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Necab3Q9D6J4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Necab3Q9D6J4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Necab3Q9D6J4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Necab3Q9D6J4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Necab3Q9D6J4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Necab3Q9D6J4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.56■■□□□ 1.04
Necab3Q9D6J4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.56■■□□□ 1.04
Necab3Q9D6J4 Golgb1-201ENSMUST00000023534 498 ntBASIC21.56■■□□□ 1.04
Necab3Q9D6J4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Necab3Q9D6J4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.56■■□□□ 1.04
Necab3Q9D6J4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Necab3Q9D6J4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Necab3Q9D6J4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.55■■□□□ 1.04
Necab3Q9D6J4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Necab3Q9D6J4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Necab3Q9D6J4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Necab3Q9D6J4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Necab3Q9D6J4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Necab3Q9D6J4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.54■■□□□ 1.04
Necab3Q9D6J4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.54■■□□□ 1.04
Necab3Q9D6J4 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.53■■□□□ 1.04
Necab3Q9D6J4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Necab3Q9D6J4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.53■■□□□ 1.04
Necab3Q9D6J4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Necab3Q9D6J4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.53■■□□□ 1.04
Necab3Q9D6J4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Necab3Q9D6J4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Necab3Q9D6J4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.52■■□□□ 1.04
Necab3Q9D6J4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.52■■□□□ 1.04
Necab3Q9D6J4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Necab3Q9D6J4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Necab3Q9D6J4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Necab3Q9D6J4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Necab3Q9D6J4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Necab3Q9D6J4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Necab3Q9D6J4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Necab3Q9D6J4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Necab3Q9D6J4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Necab3Q9D6J4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Necab3Q9D6J4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Necab3Q9D6J4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.51■■□□□ 1.03
Necab3Q9D6J4 Gm12821-201ENSMUST00000120022 600 ntBASIC21.51■■□□□ 1.03
Necab3Q9D6J4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Necab3Q9D6J4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Necab3Q9D6J4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Necab3Q9D6J4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Necab3Q9D6J4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Necab3Q9D6J4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Necab3Q9D6J4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
Necab3Q9D6J4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Necab3Q9D6J4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Necab3Q9D6J4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Necab3Q9D6J4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.5■■□□□ 1.03
Necab3Q9D6J4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Necab3Q9D6J4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Necab3Q9D6J4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Necab3Q9D6J4 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.5■■□□□ 1.03
Necab3Q9D6J4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Necab3Q9D6J4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Necab3Q9D6J4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
Necab3Q9D6J4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Necab3Q9D6J4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Necab3Q9D6J4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Necab3Q9D6J4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Necab3Q9D6J4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Necab3Q9D6J4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.48■■□□□ 1.03
Necab3Q9D6J4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms