Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf138Q9CQE0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Rnf138Q9CQE0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf138Q9CQE0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf138Q9CQE0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf138Q9CQE0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf138Q9CQE0 Gm22238-201ENSMUST00000175222 88 ntBASIC20.11■□□□□ 0.81
Rnf138Q9CQE0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf138Q9CQE0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.1■□□□□ 0.81
Rnf138Q9CQE0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf138Q9CQE0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf138Q9CQE0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf138Q9CQE0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf138Q9CQE0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf138Q9CQE0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf138Q9CQE0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf138Q9CQE0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.09■□□□□ 0.81
Rnf138Q9CQE0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.09■□□□□ 0.81
Rnf138Q9CQE0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Rnf138Q9CQE0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf138Q9CQE0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf138Q9CQE0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf138Q9CQE0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf138Q9CQE0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Rnf138Q9CQE0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.08■□□□□ 0.8
Rnf138Q9CQE0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf138Q9CQE0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.08■□□□□ 0.8
Rnf138Q9CQE0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf138Q9CQE0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.07■□□□□ 0.8
Rnf138Q9CQE0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.07■□□□□ 0.8
Rnf138Q9CQE0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf138Q9CQE0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf138Q9CQE0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf138Q9CQE0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf138Q9CQE0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
Rnf138Q9CQE0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf138Q9CQE0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Rnf138Q9CQE0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf138Q9CQE0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf138Q9CQE0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf138Q9CQE0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf138Q9CQE0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Rnf138Q9CQE0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf138Q9CQE0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf138Q9CQE0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf138Q9CQE0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf138Q9CQE0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf138Q9CQE0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rnf138Q9CQE0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf138Q9CQE0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf138Q9CQE0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Rnf138Q9CQE0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf138Q9CQE0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.04■□□□□ 0.8
Rnf138Q9CQE0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf138Q9CQE0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf138Q9CQE0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.03■□□□□ 0.8
Rnf138Q9CQE0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf138Q9CQE0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf138Q9CQE0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.03■□□□□ 0.8
Rnf138Q9CQE0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf138Q9CQE0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf138Q9CQE0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf138Q9CQE0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
Rnf138Q9CQE0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.02■□□□□ 0.8
Rnf138Q9CQE0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf138Q9CQE0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Rnf138Q9CQE0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf138Q9CQE0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rnf138Q9CQE0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf138Q9CQE0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf138Q9CQE0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf138Q9CQE0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf138Q9CQE0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf138Q9CQE0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf138Q9CQE0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rnf138Q9CQE0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.01■□□□□ 0.79
Rnf138Q9CQE0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf138Q9CQE0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf138Q9CQE0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf138Q9CQE0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf138Q9CQE0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf138Q9CQE0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf138Q9CQE0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf138Q9CQE0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf138Q9CQE0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rnf138Q9CQE0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf138Q9CQE0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20■□□□□ 0.79
Rnf138Q9CQE0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Rnf138Q9CQE0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf138Q9CQE0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf138Q9CQE0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.99■□□□□ 0.79
Rnf138Q9CQE0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Rnf138Q9CQE0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf138Q9CQE0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf138Q9CQE0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf138Q9CQE0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf138Q9CQE0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf138Q9CQE0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.98■□□□□ 0.79
Rnf138Q9CQE0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf138Q9CQE0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms