Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhgb1Q91XX8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhgb1Q91XX8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhgb1Q91XX8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.03■■□□□ 1.12
Pcdhgb1Q91XX8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.03■■□□□ 1.12
Pcdhgb1Q91XX8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhgb1Q91XX8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhgb1Q91XX8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Pcdhgb1Q91XX8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhgb1Q91XX8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhgb1Q91XX8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhgb1Q91XX8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.02■■□□□ 1.12
Pcdhgb1Q91XX8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Pcdhgb1Q91XX8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Pcdhgb1Q91XX8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhgb1Q91XX8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.01■■□□□ 1.11
Pcdhgb1Q91XX8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.01■■□□□ 1.11
Pcdhgb1Q91XX8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhgb1Q91XX8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Pcdhgb1Q91XX8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhgb1Q91XX8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhgb1Q91XX8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhgb1Q91XX8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhgb1Q91XX8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pcdhgb1Q91XX8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22■■□□□ 1.11
Pcdhgb1Q91XX8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhgb1Q91XX8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhgb1Q91XX8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Pcdhgb1Q91XX8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.99■■□□□ 1.11
Pcdhgb1Q91XX8 Gm40881-201ENSMUST00000223397 166 ntBASIC21.99■■□□□ 1.11
Pcdhgb1Q91XX8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Pcdhgb1Q91XX8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Pcdhgb1Q91XX8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
Pcdhgb1Q91XX8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhgb1Q91XX8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhgb1Q91XX8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhgb1Q91XX8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhgb1Q91XX8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Pcdhgb1Q91XX8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhgb1Q91XX8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhgb1Q91XX8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhgb1Q91XX8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Pcdhgb1Q91XX8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Pcdhgb1Q91XX8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.97■■□□□ 1.11
Pcdhgb1Q91XX8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhgb1Q91XX8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.97■■□□□ 1.11
Pcdhgb1Q91XX8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Pcdhgb1Q91XX8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhgb1Q91XX8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhgb1Q91XX8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhgb1Q91XX8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhgb1Q91XX8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhgb1Q91XX8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
Pcdhgb1Q91XX8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.95■■□□□ 1.1
Pcdhgb1Q91XX8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.95■■□□□ 1.1
Pcdhgb1Q91XX8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Pcdhgb1Q91XX8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhgb1Q91XX8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhgb1Q91XX8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhgb1Q91XX8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhgb1Q91XX8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhgb1Q91XX8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhgb1Q91XX8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhgb1Q91XX8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhgb1Q91XX8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhgb1Q91XX8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhgb1Q91XX8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhgb1Q91XX8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.93■■□□□ 1.1
Pcdhgb1Q91XX8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhgb1Q91XX8 Gm10399-202ENSMUST00000202768 748 ntBASIC21.93■■□□□ 1.1
Pcdhgb1Q91XX8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhgb1Q91XX8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhgb1Q91XX8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
Pcdhgb1Q91XX8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhgb1Q91XX8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhgb1Q91XX8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhgb1Q91XX8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhgb1Q91XX8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.92■■□□□ 1.1
Pcdhgb1Q91XX8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.92■■□□□ 1.1
Pcdhgb1Q91XX8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhgb1Q91XX8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhgb1Q91XX8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhgb1Q91XX8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhgb1Q91XX8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhgb1Q91XX8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhgb1Q91XX8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhgb1Q91XX8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhgb1Q91XX8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhgb1Q91XX8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhgb1Q91XX8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhgb1Q91XX8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhgb1Q91XX8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.9■■□□□ 1.1
Pcdhgb1Q91XX8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.9■■□□□ 1.1
Pcdhgb1Q91XX8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhgb1Q91XX8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdhgb1Q91XX8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.89■■□□□ 1.09
Pcdhgb1Q91XX8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhgb1Q91XX8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Pcdhgb1Q91XX8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhgb1Q91XX8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.89■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms