Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Trim60Q8VI40 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim60Q8VI40 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim60Q8VI40 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim60Q8VI40 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim60Q8VI40 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim60Q8VI40 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
Trim60Q8VI40 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Trim60Q8VI40 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim60Q8VI40 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim60Q8VI40 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim60Q8VI40 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim60Q8VI40 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.87■■□□□ 1.09
Trim60Q8VI40 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim60Q8VI40 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim60Q8VI40 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim60Q8VI40 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim60Q8VI40 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim60Q8VI40 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim60Q8VI40 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim60Q8VI40 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim60Q8VI40 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim60Q8VI40 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim60Q8VI40 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Trim60Q8VI40 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trim60Q8VI40 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim60Q8VI40 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim60Q8VI40 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Trim60Q8VI40 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Trim60Q8VI40 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Trim60Q8VI40 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim60Q8VI40 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim60Q8VI40 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim60Q8VI40 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim60Q8VI40 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim60Q8VI40 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim60Q8VI40 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Trim60Q8VI40 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Trim60Q8VI40 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim60Q8VI40 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim60Q8VI40 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trim60Q8VI40 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Trim60Q8VI40 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim60Q8VI40 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.82■■□□□ 1.08
Trim60Q8VI40 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim60Q8VI40 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim60Q8VI40 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Trim60Q8VI40 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim60Q8VI40 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trim60Q8VI40 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim60Q8VI40 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim60Q8VI40 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim60Q8VI40 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim60Q8VI40 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim60Q8VI40 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim60Q8VI40 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim60Q8VI40 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim60Q8VI40 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Trim60Q8VI40 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim60Q8VI40 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim60Q8VI40 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim60Q8VI40 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.79■■□□□ 1.08
Trim60Q8VI40 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim60Q8VI40 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim60Q8VI40 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.79■■□□□ 1.08
Trim60Q8VI40 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim60Q8VI40 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim60Q8VI40 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim60Q8VI40 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim60Q8VI40 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim60Q8VI40 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim60Q8VI40 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim60Q8VI40 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trim60Q8VI40 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim60Q8VI40 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim60Q8VI40 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Trim60Q8VI40 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Trim60Q8VI40 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim60Q8VI40 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim60Q8VI40 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.76■■□□□ 1.07
Trim60Q8VI40 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim60Q8VI40 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Trim60Q8VI40 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.76■■□□□ 1.07
Trim60Q8VI40 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim60Q8VI40 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim60Q8VI40 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.76■■□□□ 1.07
Trim60Q8VI40 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Trim60Q8VI40 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim60Q8VI40 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Trim60Q8VI40 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim60Q8VI40 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim60Q8VI40 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim60Q8VI40 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim60Q8VI40 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Trim60Q8VI40 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim60Q8VI40 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim60Q8VI40 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
Trim60Q8VI40 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trim60Q8VI40 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim60Q8VI40 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms