Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Rab40cQ8VHQ4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rab40cQ8VHQ4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rab40cQ8VHQ4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rab40cQ8VHQ4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab40cQ8VHQ4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.23■□□□□ 0.35
Rab40cQ8VHQ4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rab40cQ8VHQ4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab40cQ8VHQ4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rab40cQ8VHQ4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab40cQ8VHQ4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab40cQ8VHQ4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab40cQ8VHQ4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab40cQ8VHQ4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab40cQ8VHQ4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rab40cQ8VHQ4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rab40cQ8VHQ4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.22■□□□□ 0.35
Rab40cQ8VHQ4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rab40cQ8VHQ4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rab40cQ8VHQ4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rab40cQ8VHQ4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rab40cQ8VHQ4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.21■□□□□ 0.35
Rab40cQ8VHQ4 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.21■□□□□ 0.35
Rab40cQ8VHQ4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rab40cQ8VHQ4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rab40cQ8VHQ4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Rab40cQ8VHQ4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rab40cQ8VHQ4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Rab40cQ8VHQ4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.2■□□□□ 0.34
Rab40cQ8VHQ4 Gm45364-201ENSMUST00000210883 159 ntBASIC17.2■□□□□ 0.34
Rab40cQ8VHQ4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rab40cQ8VHQ4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rab40cQ8VHQ4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rab40cQ8VHQ4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab40cQ8VHQ4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab40cQ8VHQ4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab40cQ8VHQ4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab40cQ8VHQ4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab40cQ8VHQ4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rab40cQ8VHQ4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab40cQ8VHQ4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab40cQ8VHQ4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rab40cQ8VHQ4 Gm7432-201ENSMUST00000210343 879 ntBASIC17.18■□□□□ 0.34
Rab40cQ8VHQ4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rab40cQ8VHQ4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Rab40cQ8VHQ4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab40cQ8VHQ4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab40cQ8VHQ4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab40cQ8VHQ4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab40cQ8VHQ4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab40cQ8VHQ4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rab40cQ8VHQ4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab40cQ8VHQ4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab40cQ8VHQ4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab40cQ8VHQ4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab40cQ8VHQ4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab40cQ8VHQ4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab40cQ8VHQ4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab40cQ8VHQ4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab40cQ8VHQ4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rab40cQ8VHQ4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab40cQ8VHQ4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rab40cQ8VHQ4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rab40cQ8VHQ4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.16■□□□□ 0.34
Rab40cQ8VHQ4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab40cQ8VHQ4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab40cQ8VHQ4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab40cQ8VHQ4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab40cQ8VHQ4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab40cQ8VHQ4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.16■□□□□ 0.34
Rab40cQ8VHQ4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab40cQ8VHQ4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab40cQ8VHQ4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab40cQ8VHQ4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rab40cQ8VHQ4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.16■□□□□ 0.34
Rab40cQ8VHQ4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rab40cQ8VHQ4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rab40cQ8VHQ4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab40cQ8VHQ4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Rab40cQ8VHQ4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rab40cQ8VHQ4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rab40cQ8VHQ4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab40cQ8VHQ4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rab40cQ8VHQ4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.15■□□□□ 0.34
Rab40cQ8VHQ4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rab40cQ8VHQ4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rab40cQ8VHQ4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.14■□□□□ 0.33
Rab40cQ8VHQ4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab40cQ8VHQ4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Rab40cQ8VHQ4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rab40cQ8VHQ4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.14■□□□□ 0.33
Rab40cQ8VHQ4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rab40cQ8VHQ4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.14■□□□□ 0.33
Rab40cQ8VHQ4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab40cQ8VHQ4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab40cQ8VHQ4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab40cQ8VHQ4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab40cQ8VHQ4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab40cQ8VHQ4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rab40cQ8VHQ4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms