Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Cdt1Q8R4E9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdt1Q8R4E9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cdt1Q8R4E9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdt1Q8R4E9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdt1Q8R4E9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.42■□□□□ 0.86
Cdt1Q8R4E9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.42■□□□□ 0.86
Cdt1Q8R4E9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.42■□□□□ 0.86
Cdt1Q8R4E9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Cdt1Q8R4E9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdt1Q8R4E9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.42■□□□□ 0.86
Cdt1Q8R4E9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cdt1Q8R4E9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdt1Q8R4E9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cdt1Q8R4E9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdt1Q8R4E9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdt1Q8R4E9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdt1Q8R4E9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cdt1Q8R4E9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdt1Q8R4E9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdt1Q8R4E9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdt1Q8R4E9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cdt1Q8R4E9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.4■□□□□ 0.86
Cdt1Q8R4E9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cdt1Q8R4E9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cdt1Q8R4E9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.39■□□□□ 0.85
Cdt1Q8R4E9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdt1Q8R4E9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdt1Q8R4E9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdt1Q8R4E9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.38■□□□□ 0.85
Cdt1Q8R4E9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdt1Q8R4E9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdt1Q8R4E9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cdt1Q8R4E9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cdt1Q8R4E9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdt1Q8R4E9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdt1Q8R4E9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdt1Q8R4E9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdt1Q8R4E9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdt1Q8R4E9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Cdt1Q8R4E9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Cdt1Q8R4E9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.37■□□□□ 0.85
Cdt1Q8R4E9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdt1Q8R4E9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdt1Q8R4E9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdt1Q8R4E9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cdt1Q8R4E9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdt1Q8R4E9 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.36■□□□□ 0.85
Cdt1Q8R4E9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.36■□□□□ 0.85
Cdt1Q8R4E9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdt1Q8R4E9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cdt1Q8R4E9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdt1Q8R4E9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdt1Q8R4E9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Cdt1Q8R4E9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdt1Q8R4E9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Cdt1Q8R4E9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cdt1Q8R4E9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdt1Q8R4E9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdt1Q8R4E9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.35■□□□□ 0.85
Cdt1Q8R4E9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.35■□□□□ 0.85
Cdt1Q8R4E9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdt1Q8R4E9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdt1Q8R4E9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdt1Q8R4E9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdt1Q8R4E9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.34■□□□□ 0.85
Cdt1Q8R4E9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Cdt1Q8R4E9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.34■□□□□ 0.85
Cdt1Q8R4E9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.34■□□□□ 0.85
Cdt1Q8R4E9 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.34■□□□□ 0.85
Cdt1Q8R4E9 Serp2-204ENSMUST00000228055 705 ntBASIC20.34■□□□□ 0.85
Cdt1Q8R4E9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdt1Q8R4E9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdt1Q8R4E9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cdt1Q8R4E9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdt1Q8R4E9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdt1Q8R4E9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.33■□□□□ 0.85
Cdt1Q8R4E9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdt1Q8R4E9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cdt1Q8R4E9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cdt1Q8R4E9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.33■□□□□ 0.84
Cdt1Q8R4E9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Cdt1Q8R4E9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cdt1Q8R4E9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdt1Q8R4E9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdt1Q8R4E9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cdt1Q8R4E9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cdt1Q8R4E9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdt1Q8R4E9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cdt1Q8R4E9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdt1Q8R4E9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdt1Q8R4E9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Cdt1Q8R4E9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.31■□□□□ 0.84
Cdt1Q8R4E9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.31■□□□□ 0.84
Cdt1Q8R4E9 Gm13241-201ENSMUST00000094493 780 ntBASIC20.31■□□□□ 0.84
Cdt1Q8R4E9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cdt1Q8R4E9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdt1Q8R4E9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdt1Q8R4E9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cdt1Q8R4E9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms