Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vmn1r28Q8R2C9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vmn1r28Q8R2C9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vmn1r28Q8R2C9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vmn1r28Q8R2C9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vmn1r28Q8R2C9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vmn1r28Q8R2C9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vmn1r28Q8R2C9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vmn1r28Q8R2C9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vmn1r28Q8R2C9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vmn1r28Q8R2C9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vmn1r28Q8R2C9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vmn1r28Q8R2C9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vmn1r28Q8R2C9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.43■□□□□ 0.7
Vmn1r28Q8R2C9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vmn1r28Q8R2C9 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.43■□□□□ 0.7
Vmn1r28Q8R2C9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vmn1r28Q8R2C9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.43■□□□□ 0.7
Vmn1r28Q8R2C9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vmn1r28Q8R2C9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vmn1r28Q8R2C9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Vmn1r28Q8R2C9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Vmn1r28Q8R2C9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Vmn1r28Q8R2C9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vmn1r28Q8R2C9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vmn1r28Q8R2C9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vmn1r28Q8R2C9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vmn1r28Q8R2C9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.42■□□□□ 0.7
Vmn1r28Q8R2C9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vmn1r28Q8R2C9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vmn1r28Q8R2C9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vmn1r28Q8R2C9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.41■□□□□ 0.7
Vmn1r28Q8R2C9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vmn1r28Q8R2C9 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.41■□□□□ 0.7
Vmn1r28Q8R2C9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vmn1r28Q8R2C9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vmn1r28Q8R2C9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Vmn1r28Q8R2C9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vmn1r28Q8R2C9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.4■□□□□ 0.7
Vmn1r28Q8R2C9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vmn1r28Q8R2C9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vmn1r28Q8R2C9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vmn1r28Q8R2C9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.39■□□□□ 0.7
Vmn1r28Q8R2C9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.39■□□□□ 0.7
Vmn1r28Q8R2C9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.39■□□□□ 0.7
Vmn1r28Q8R2C9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Vmn1r28Q8R2C9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Vmn1r28Q8R2C9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.39■□□□□ 0.69
Vmn1r28Q8R2C9 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.39■□□□□ 0.69
Vmn1r28Q8R2C9 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.39■□□□□ 0.69
Vmn1r28Q8R2C9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vmn1r28Q8R2C9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vmn1r28Q8R2C9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vmn1r28Q8R2C9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Vmn1r28Q8R2C9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Vmn1r28Q8R2C9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Vmn1r28Q8R2C9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.38■□□□□ 0.69
Vmn1r28Q8R2C9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.38■□□□□ 0.69
Vmn1r28Q8R2C9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.38■□□□□ 0.69
Vmn1r28Q8R2C9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vmn1r28Q8R2C9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vmn1r28Q8R2C9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vmn1r28Q8R2C9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vmn1r28Q8R2C9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Vmn1r28Q8R2C9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vmn1r28Q8R2C9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Vmn1r28Q8R2C9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vmn1r28Q8R2C9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vmn1r28Q8R2C9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.37■□□□□ 0.69
Vmn1r28Q8R2C9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Vmn1r28Q8R2C9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vmn1r28Q8R2C9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
Vmn1r28Q8R2C9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Vmn1r28Q8R2C9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vmn1r28Q8R2C9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.36■□□□□ 0.69
Vmn1r28Q8R2C9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Vmn1r28Q8R2C9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vmn1r28Q8R2C9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Vmn1r28Q8R2C9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vmn1r28Q8R2C9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vmn1r28Q8R2C9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Vmn1r28Q8R2C9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vmn1r28Q8R2C9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vmn1r28Q8R2C9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vmn1r28Q8R2C9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vmn1r28Q8R2C9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vmn1r28Q8R2C9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vmn1r28Q8R2C9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Vmn1r28Q8R2C9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vmn1r28Q8R2C9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vmn1r28Q8R2C9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.34■□□□□ 0.69
Vmn1r28Q8R2C9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.34■□□□□ 0.69
Vmn1r28Q8R2C9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vmn1r28Q8R2C9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vmn1r28Q8R2C9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vmn1r28Q8R2C9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
Vmn1r28Q8R2C9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vmn1r28Q8R2C9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Vmn1r28Q8R2C9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.33■□□□□ 0.68
Vmn1r28Q8R2C9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms