Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ebf4Q8K4J2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Ebf4Q8K4J2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ebf4Q8K4J2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ebf4Q8K4J2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.29■□□□□ 0.68
Ebf4Q8K4J2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ebf4Q8K4J2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ebf4Q8K4J2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ebf4Q8K4J2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ebf4Q8K4J2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ebf4Q8K4J2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ebf4Q8K4J2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ebf4Q8K4J2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ebf4Q8K4J2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ebf4Q8K4J2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf4Q8K4J2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf4Q8K4J2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
Ebf4Q8K4J2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf4Q8K4J2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Ebf4Q8K4J2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf4Q8K4J2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.28■□□□□ 0.68
Ebf4Q8K4J2 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.28■□□□□ 0.68
Ebf4Q8K4J2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf4Q8K4J2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf4Q8K4J2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf4Q8K4J2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ebf4Q8K4J2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ebf4Q8K4J2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ebf4Q8K4J2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ebf4Q8K4J2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ebf4Q8K4J2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ebf4Q8K4J2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.27■□□□□ 0.68
Ebf4Q8K4J2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ebf4Q8K4J2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ebf4Q8K4J2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.26■□□□□ 0.67
Ebf4Q8K4J2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ebf4Q8K4J2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ebf4Q8K4J2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ebf4Q8K4J2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ebf4Q8K4J2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ebf4Q8K4J2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ebf4Q8K4J2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.26■□□□□ 0.67
Ebf4Q8K4J2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ebf4Q8K4J2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ebf4Q8K4J2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ebf4Q8K4J2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ebf4Q8K4J2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ebf4Q8K4J2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ebf4Q8K4J2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ebf4Q8K4J2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf4Q8K4J2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Ebf4Q8K4J2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf4Q8K4J2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf4Q8K4J2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf4Q8K4J2 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.24■□□□□ 0.67
Ebf4Q8K4J2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ebf4Q8K4J2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.24■□□□□ 0.67
Ebf4Q8K4J2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf4Q8K4J2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf4Q8K4J2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ebf4Q8K4J2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf4Q8K4J2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ebf4Q8K4J2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ebf4Q8K4J2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ebf4Q8K4J2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.23■□□□□ 0.67
Ebf4Q8K4J2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ebf4Q8K4J2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ebf4Q8K4J2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ebf4Q8K4J2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ebf4Q8K4J2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ebf4Q8K4J2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ebf4Q8K4J2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ebf4Q8K4J2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Ebf4Q8K4J2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ebf4Q8K4J2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ebf4Q8K4J2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf4Q8K4J2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf4Q8K4J2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf4Q8K4J2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf4Q8K4J2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf4Q8K4J2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf4Q8K4J2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf4Q8K4J2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf4Q8K4J2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ebf4Q8K4J2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf4Q8K4J2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.2■□□□□ 0.66
Ebf4Q8K4J2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.2■□□□□ 0.66
Ebf4Q8K4J2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ebf4Q8K4J2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ebf4Q8K4J2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ebf4Q8K4J2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.19■□□□□ 0.66
Ebf4Q8K4J2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ebf4Q8K4J2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.19■□□□□ 0.66
Ebf4Q8K4J2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ebf4Q8K4J2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ebf4Q8K4J2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ebf4Q8K4J2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ebf4Q8K4J2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ebf4Q8K4J2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ebf4Q8K4J2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms