Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC32.33■■■□□ 2.77
Abca8bQ8K440 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC32.32■■■□□ 2.76
Abca8bQ8K440 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Abca8bQ8K440 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Abca8bQ8K440 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Abca8bQ8K440 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC32.31■■■□□ 2.76
Abca8bQ8K440 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
Abca8bQ8K440 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC32.31■■■□□ 2.76
Abca8bQ8K440 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Abca8bQ8K440 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Abca8bQ8K440 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Abca8bQ8K440 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Abca8bQ8K440 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC32.29■■■□□ 2.76
Abca8bQ8K440 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Abca8bQ8K440 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Abca8bQ8K440 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Abca8bQ8K440 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Abca8bQ8K440 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Abca8bQ8K440 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Abca8bQ8K440 Gm12251-201ENSMUST00000117893 792 ntBASIC32.29■■■□□ 2.76
Abca8bQ8K440 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
Abca8bQ8K440 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Abca8bQ8K440 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Abca8bQ8K440 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Abca8bQ8K440 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC32.28■■■□□ 2.76
Abca8bQ8K440 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC32.28■■■□□ 2.76
Abca8bQ8K440 Gm43173-201ENSMUST00000202246 593 ntBASIC32.28■■■□□ 2.76
Abca8bQ8K440 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC32.28■■■□□ 2.76
Abca8bQ8K440 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Abca8bQ8K440 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Abca8bQ8K440 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC32.27■■■□□ 2.76
Abca8bQ8K440 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC32.27■■■□□ 2.76
Abca8bQ8K440 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC32.26■■■□□ 2.76
Abca8bQ8K440 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Abca8bQ8K440 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC32.26■■■□□ 2.76
Abca8bQ8K440 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC32.26■■■□□ 2.76
Abca8bQ8K440 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Abca8bQ8K440 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC32.25■■■□□ 2.75
Abca8bQ8K440 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Abca8bQ8K440 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Abca8bQ8K440 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
Abca8bQ8K440 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Abca8bQ8K440 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Abca8bQ8K440 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC32.24■■■□□ 2.75
Abca8bQ8K440 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
Abca8bQ8K440 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC32.24■■■□□ 2.75
Abca8bQ8K440 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Abca8bQ8K440 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Abca8bQ8K440 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Abca8bQ8K440 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Abca8bQ8K440 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Abca8bQ8K440 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC32.22■■■□□ 2.75
Abca8bQ8K440 Mir7075-201ENSMUST00000184187 82 ntBASIC32.22■■■□□ 2.75
Abca8bQ8K440 Krt8-ps-201ENSMUST00000208495 945 ntBASIC32.22■■■□□ 2.75
Abca8bQ8K440 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC32.22■■■□□ 2.75
Abca8bQ8K440 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Abca8bQ8K440 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC32.21■■■□□ 2.75
Abca8bQ8K440 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC32.21■■■□□ 2.75
Abca8bQ8K440 Gm9870-201ENSMUST00000063874 645 ntBASIC32.2■■■□□ 2.75
Abca8bQ8K440 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC32.2■■■□□ 2.74
Abca8bQ8K440 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC32.19■■■□□ 2.74
Abca8bQ8K440 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC32.19■■■□□ 2.74
Abca8bQ8K440 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Abca8bQ8K440 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Abca8bQ8K440 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Abca8bQ8K440 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Abca8bQ8K440 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Abca8bQ8K440 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Abca8bQ8K440 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Abca8bQ8K440 AC116713.1-201ENSMUST00000215074 430 ntBASIC32.17■■■□□ 2.74
Abca8bQ8K440 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC32.17■■■□□ 2.74
Abca8bQ8K440 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC32.17■■■□□ 2.74
Abca8bQ8K440 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Abca8bQ8K440 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Abca8bQ8K440 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Abca8bQ8K440 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC32.16■■■□□ 2.74
Abca8bQ8K440 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC32.16■■■□□ 2.74
Abca8bQ8K440 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Abca8bQ8K440 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC32.15■■■□□ 2.74
Abca8bQ8K440 Gm10657-201ENSMUST00000193528 1031 ntBASIC32.15■■■□□ 2.74
Abca8bQ8K440 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Abca8bQ8K440 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Abca8bQ8K440 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC32.14■■■□□ 2.74
Abca8bQ8K440 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC32.14■■■□□ 2.74
Abca8bQ8K440 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Abca8bQ8K440 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC32.14■■■□□ 2.74
Abca8bQ8K440 Gm5874-201ENSMUST00000096101 508 ntBASIC32.14■■■□□ 2.74
Abca8bQ8K440 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC32.14■■■□□ 2.73
Abca8bQ8K440 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC32.13■■■□□ 2.73
Abca8bQ8K440 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Abca8bQ8K440 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC32.13■■■□□ 2.73
Abca8bQ8K440 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Abca8bQ8K440 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Abca8bQ8K440 Gm8770-201ENSMUST00000121113 1109 ntBASIC32.12■■■□□ 2.73
Abca8bQ8K440 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Abca8bQ8K440 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Abca8bQ8K440 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Abca8bQ8K440 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Abca8bQ8K440 Gm26571-201ENSMUST00000181399 666 ntBASIC32.11■■■□□ 2.73
Abca8bQ8K440 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC32.11■■■□□ 2.73
Retrieved 100 of 76,532 protein–RNA pairs in 224.6 ms