Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.52■□□□□ 0.88
Trnt1Q8K1J6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trnt1Q8K1J6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trnt1Q8K1J6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Trnt1Q8K1J6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trnt1Q8K1J6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trnt1Q8K1J6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trnt1Q8K1J6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trnt1Q8K1J6 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.51■□□□□ 0.87
Trnt1Q8K1J6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trnt1Q8K1J6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trnt1Q8K1J6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trnt1Q8K1J6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trnt1Q8K1J6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trnt1Q8K1J6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trnt1Q8K1J6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trnt1Q8K1J6 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.5■□□□□ 0.87
Trnt1Q8K1J6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trnt1Q8K1J6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trnt1Q8K1J6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trnt1Q8K1J6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trnt1Q8K1J6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trnt1Q8K1J6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.49■□□□□ 0.87
Trnt1Q8K1J6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trnt1Q8K1J6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Trnt1Q8K1J6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Trnt1Q8K1J6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.48■□□□□ 0.87
Trnt1Q8K1J6 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.48■□□□□ 0.87
Trnt1Q8K1J6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trnt1Q8K1J6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trnt1Q8K1J6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trnt1Q8K1J6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Trnt1Q8K1J6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.48■□□□□ 0.87
Trnt1Q8K1J6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Trnt1Q8K1J6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trnt1Q8K1J6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trnt1Q8K1J6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trnt1Q8K1J6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.47■□□□□ 0.87
Trnt1Q8K1J6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Trnt1Q8K1J6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.46■□□□□ 0.87
Trnt1Q8K1J6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trnt1Q8K1J6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trnt1Q8K1J6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.46■□□□□ 0.87
Trnt1Q8K1J6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trnt1Q8K1J6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trnt1Q8K1J6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Trnt1Q8K1J6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.46■□□□□ 0.87
Trnt1Q8K1J6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trnt1Q8K1J6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trnt1Q8K1J6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trnt1Q8K1J6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Trnt1Q8K1J6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trnt1Q8K1J6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.45■□□□□ 0.86
Trnt1Q8K1J6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trnt1Q8K1J6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trnt1Q8K1J6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Trnt1Q8K1J6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trnt1Q8K1J6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trnt1Q8K1J6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trnt1Q8K1J6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Trnt1Q8K1J6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trnt1Q8K1J6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.44■□□□□ 0.86
Trnt1Q8K1J6 Gm45444-201ENSMUST00000211394 898 ntBASIC20.44■□□□□ 0.86
Trnt1Q8K1J6 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.44■□□□□ 0.86
Trnt1Q8K1J6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trnt1Q8K1J6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trnt1Q8K1J6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.44■□□□□ 0.86
Trnt1Q8K1J6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trnt1Q8K1J6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trnt1Q8K1J6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trnt1Q8K1J6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trnt1Q8K1J6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trnt1Q8K1J6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trnt1Q8K1J6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.43■□□□□ 0.86
Trnt1Q8K1J6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trnt1Q8K1J6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trnt1Q8K1J6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trnt1Q8K1J6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Trnt1Q8K1J6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trnt1Q8K1J6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Trnt1Q8K1J6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Trnt1Q8K1J6 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.42■□□□□ 0.86
Trnt1Q8K1J6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Trnt1Q8K1J6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trnt1Q8K1J6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.41■□□□□ 0.86
Trnt1Q8K1J6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trnt1Q8K1J6 Gm5921-201ENSMUST00000075898 882 ntBASIC20.41■□□□□ 0.86
Trnt1Q8K1J6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trnt1Q8K1J6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trnt1Q8K1J6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Trnt1Q8K1J6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trnt1Q8K1J6 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trnt1Q8K1J6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.41■□□□□ 0.86
Trnt1Q8K1J6 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.4■□□□□ 0.86
Trnt1Q8K1J6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.4■□□□□ 0.86
Trnt1Q8K1J6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.4■□□□□ 0.86
Trnt1Q8K1J6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trnt1Q8K1J6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trnt1Q8K1J6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Trnt1Q8K1J6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms