Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Rtn1Q8K0T0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC24.51■■□□□ 1.51
Rtn1Q8K0T0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Rtn1Q8K0T0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rtn1Q8K0T0 Gm8093-201ENSMUST00000128935 1892 ntBASIC24.5■■□□□ 1.51
Rtn1Q8K0T0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Rtn1Q8K0T0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC24.5■■□□□ 1.51
Rtn1Q8K0T0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Rtn1Q8K0T0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Rtn1Q8K0T0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC24.5■■□□□ 1.51
Rtn1Q8K0T0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Rtn1Q8K0T0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rtn1Q8K0T0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rtn1Q8K0T0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rtn1Q8K0T0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
Rtn1Q8K0T0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rtn1Q8K0T0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Rtn1Q8K0T0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC24.49■■□□□ 1.51
Rtn1Q8K0T0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rtn1Q8K0T0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Rtn1Q8K0T0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC24.49■■□□□ 1.51
Rtn1Q8K0T0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rtn1Q8K0T0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Rtn1Q8K0T0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC24.48■■□□□ 1.51
Rtn1Q8K0T0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC24.48■■□□□ 1.51
Rtn1Q8K0T0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
Rtn1Q8K0T0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC24.48■■□□□ 1.51
Rtn1Q8K0T0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC24.48■■□□□ 1.51
Rtn1Q8K0T0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rtn1Q8K0T0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rtn1Q8K0T0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rtn1Q8K0T0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Rtn1Q8K0T0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Rtn1Q8K0T0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rtn1Q8K0T0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rtn1Q8K0T0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Rtn1Q8K0T0 Gm37415-201ENSMUST00000192265 2054 ntBASIC24.46■■□□□ 1.51
Rtn1Q8K0T0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rtn1Q8K0T0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rtn1Q8K0T0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Rtn1Q8K0T0 Gm16464-201ENSMUST00000117815 1095 ntBASIC24.46■■□□□ 1.51
Rtn1Q8K0T0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rtn1Q8K0T0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rtn1Q8K0T0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rtn1Q8K0T0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rtn1Q8K0T0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rtn1Q8K0T0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rtn1Q8K0T0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC24.46■■□□□ 1.51
Rtn1Q8K0T0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Rtn1Q8K0T0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Rtn1Q8K0T0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rtn1Q8K0T0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rtn1Q8K0T0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Rtn1Q8K0T0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
Rtn1Q8K0T0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rtn1Q8K0T0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Rtn1Q8K0T0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rtn1Q8K0T0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rtn1Q8K0T0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rtn1Q8K0T0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rtn1Q8K0T0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
Rtn1Q8K0T0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rtn1Q8K0T0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rtn1Q8K0T0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Rtn1Q8K0T0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Rtn1Q8K0T0 Dmtn-209ENSMUST00000228295 2572 ntBASIC24.43■■□□□ 1.5
Rtn1Q8K0T0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rtn1Q8K0T0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC24.43■■□□□ 1.5
Rtn1Q8K0T0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC24.43■■□□□ 1.5
Rtn1Q8K0T0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
Rtn1Q8K0T0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rtn1Q8K0T0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Rtn1Q8K0T0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rtn1Q8K0T0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Rtn1Q8K0T0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rtn1Q8K0T0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rtn1Q8K0T0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rtn1Q8K0T0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rtn1Q8K0T0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rtn1Q8K0T0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Rtn1Q8K0T0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Rtn1Q8K0T0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Rtn1Q8K0T0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rtn1Q8K0T0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Rtn1Q8K0T0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Rtn1Q8K0T0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.4■■□□□ 1.5
Rtn1Q8K0T0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
Rtn1Q8K0T0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rtn1Q8K0T0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rtn1Q8K0T0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rtn1Q8K0T0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC24.39■■□□□ 1.5
Rtn1Q8K0T0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Rtn1Q8K0T0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Rtn1Q8K0T0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
Rtn1Q8K0T0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Rtn1Q8K0T0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Rtn1Q8K0T0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Rtn1Q8K0T0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
Rtn1Q8K0T0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rtn1Q8K0T0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms