Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp28Q8CGV8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp28Q8CGV8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp28Q8CGV8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp28Q8CGV8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp28Q8CGV8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp28Q8CGV8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp28Q8CGV8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp28Q8CGV8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.94■□□□□ 0.46
Mmp28Q8CGV8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp28Q8CGV8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp28Q8CGV8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp28Q8CGV8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.94■□□□□ 0.46
Mmp28Q8CGV8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp28Q8CGV8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Mmp28Q8CGV8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp28Q8CGV8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp28Q8CGV8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.93■□□□□ 0.46
Mmp28Q8CGV8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp28Q8CGV8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp28Q8CGV8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp28Q8CGV8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp28Q8CGV8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Mmp28Q8CGV8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp28Q8CGV8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp28Q8CGV8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp28Q8CGV8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp28Q8CGV8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp28Q8CGV8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp28Q8CGV8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp28Q8CGV8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp28Q8CGV8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp28Q8CGV8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.92■□□□□ 0.46
Mmp28Q8CGV8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp28Q8CGV8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Mmp28Q8CGV8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp28Q8CGV8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp28Q8CGV8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp28Q8CGV8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp28Q8CGV8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.91■□□□□ 0.46
Mmp28Q8CGV8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp28Q8CGV8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp28Q8CGV8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp28Q8CGV8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp28Q8CGV8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Mmp28Q8CGV8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Mmp28Q8CGV8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Mmp28Q8CGV8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp28Q8CGV8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp28Q8CGV8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp28Q8CGV8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.89■□□□□ 0.45
Mmp28Q8CGV8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp28Q8CGV8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp28Q8CGV8 Gm11599-201ENSMUST00000118720 878 ntBASIC17.89■□□□□ 0.45
Mmp28Q8CGV8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp28Q8CGV8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Mmp28Q8CGV8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp28Q8CGV8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.88■□□□□ 0.45
Mmp28Q8CGV8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp28Q8CGV8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp28Q8CGV8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp28Q8CGV8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp28Q8CGV8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp28Q8CGV8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp28Q8CGV8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp28Q8CGV8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp28Q8CGV8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.87■□□□□ 0.45
Mmp28Q8CGV8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp28Q8CGV8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.87■□□□□ 0.45
Mmp28Q8CGV8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.87■□□□□ 0.45
Mmp28Q8CGV8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.86■□□□□ 0.45
Mmp28Q8CGV8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp28Q8CGV8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp28Q8CGV8 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.86■□□□□ 0.45
Mmp28Q8CGV8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp28Q8CGV8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp28Q8CGV8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp28Q8CGV8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Mmp28Q8CGV8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp28Q8CGV8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.84■□□□□ 0.45
Mmp28Q8CGV8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp28Q8CGV8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp28Q8CGV8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp28Q8CGV8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp28Q8CGV8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp28Q8CGV8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp28Q8CGV8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp28Q8CGV8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp28Q8CGV8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp28Q8CGV8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Mmp28Q8CGV8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.83■□□□□ 0.45
Mmp28Q8CGV8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Mmp28Q8CGV8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp28Q8CGV8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp28Q8CGV8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp28Q8CGV8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp28Q8CGV8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp28Q8CGV8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp28Q8CGV8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp28Q8CGV8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms