Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Calcoco1Q8CGU1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Calcoco1Q8CGU1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Calcoco1Q8CGU1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Calcoco1Q8CGU1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Calcoco1Q8CGU1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.86■■□□□ 1.09
Calcoco1Q8CGU1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Calcoco1Q8CGU1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Calcoco1Q8CGU1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Calcoco1Q8CGU1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Calcoco1Q8CGU1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Calcoco1Q8CGU1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Calcoco1Q8CGU1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Calcoco1Q8CGU1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Calcoco1Q8CGU1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Calcoco1Q8CGU1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Calcoco1Q8CGU1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Calcoco1Q8CGU1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Calcoco1Q8CGU1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Calcoco1Q8CGU1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Calcoco1Q8CGU1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.84■■□□□ 1.09
Calcoco1Q8CGU1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Calcoco1Q8CGU1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Calcoco1Q8CGU1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Calcoco1Q8CGU1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Calcoco1Q8CGU1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.83■■□□□ 1.09
Calcoco1Q8CGU1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Calcoco1Q8CGU1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.83■■□□□ 1.09
Calcoco1Q8CGU1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Calcoco1Q8CGU1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Calcoco1Q8CGU1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Calcoco1Q8CGU1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Calcoco1Q8CGU1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.82■■□□□ 1.08
Calcoco1Q8CGU1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Calcoco1Q8CGU1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Calcoco1Q8CGU1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Calcoco1Q8CGU1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Calcoco1Q8CGU1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
Calcoco1Q8CGU1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.82■■□□□ 1.08
Calcoco1Q8CGU1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Calcoco1Q8CGU1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Calcoco1Q8CGU1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Calcoco1Q8CGU1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Calcoco1Q8CGU1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.79■■□□□ 1.08
Calcoco1Q8CGU1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Calcoco1Q8CGU1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Calcoco1Q8CGU1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Calcoco1Q8CGU1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Calcoco1Q8CGU1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Calcoco1Q8CGU1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.79■■□□□ 1.08
Calcoco1Q8CGU1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Calcoco1Q8CGU1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Calcoco1Q8CGU1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Calcoco1Q8CGU1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Calcoco1Q8CGU1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Calcoco1Q8CGU1 Gm14523-201ENSMUST00000117260 558 ntBASIC21.78■■□□□ 1.08
Calcoco1Q8CGU1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.78■■□□□ 1.08
Calcoco1Q8CGU1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.78■■□□□ 1.08
Calcoco1Q8CGU1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Calcoco1Q8CGU1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Calcoco1Q8CGU1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Calcoco1Q8CGU1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Calcoco1Q8CGU1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Calcoco1Q8CGU1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Calcoco1Q8CGU1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Calcoco1Q8CGU1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Calcoco1Q8CGU1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.77■■□□□ 1.08
Calcoco1Q8CGU1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Calcoco1Q8CGU1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.77■■□□□ 1.08
Calcoco1Q8CGU1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Calcoco1Q8CGU1 Gm7332-201ENSMUST00000118351 454 ntBASIC21.77■■□□□ 1.08
Calcoco1Q8CGU1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.77■■□□□ 1.08
Calcoco1Q8CGU1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.77■■□□□ 1.08
Calcoco1Q8CGU1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Calcoco1Q8CGU1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Calcoco1Q8CGU1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Calcoco1Q8CGU1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Calcoco1Q8CGU1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Calcoco1Q8CGU1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Calcoco1Q8CGU1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Calcoco1Q8CGU1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Calcoco1Q8CGU1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Calcoco1Q8CGU1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Calcoco1Q8CGU1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Calcoco1Q8CGU1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Calcoco1Q8CGU1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.75■■□□□ 1.07
Calcoco1Q8CGU1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Calcoco1Q8CGU1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Calcoco1Q8CGU1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Calcoco1Q8CGU1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.74■■□□□ 1.07
Calcoco1Q8CGU1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Calcoco1Q8CGU1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Calcoco1Q8CGU1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Calcoco1Q8CGU1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.74■■□□□ 1.07
Calcoco1Q8CGU1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Calcoco1Q8CGU1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Calcoco1Q8CGU1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Calcoco1Q8CGU1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Calcoco1Q8CGU1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Calcoco1Q8CGU1 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms