Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.04■□□□□ 0.96
Aph1bQ8C7N7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
Aph1bQ8C7N7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Aph1bQ8C7N7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Aph1bQ8C7N7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Aph1bQ8C7N7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Aph1bQ8C7N7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Aph1bQ8C7N7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Aph1bQ8C7N7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Aph1bQ8C7N7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.03■□□□□ 0.96
Aph1bQ8C7N7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Aph1bQ8C7N7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Aph1bQ8C7N7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Aph1bQ8C7N7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Aph1bQ8C7N7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Aph1bQ8C7N7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.02■□□□□ 0.96
Aph1bQ8C7N7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.02■□□□□ 0.96
Aph1bQ8C7N7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Aph1bQ8C7N7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Aph1bQ8C7N7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Aph1bQ8C7N7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Aph1bQ8C7N7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Aph1bQ8C7N7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Aph1bQ8C7N7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Aph1bQ8C7N7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.01■□□□□ 0.95
Aph1bQ8C7N7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Aph1bQ8C7N7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Aph1bQ8C7N7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Aph1bQ8C7N7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Aph1bQ8C7N7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Aph1bQ8C7N7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Aph1bQ8C7N7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Aph1bQ8C7N7 Gm7332-201ENSMUST00000118351 454 ntBASIC21■□□□□ 0.95
Aph1bQ8C7N7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21■□□□□ 0.95
Aph1bQ8C7N7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
Aph1bQ8C7N7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21■□□□□ 0.95
Aph1bQ8C7N7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.99■□□□□ 0.95
Aph1bQ8C7N7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Aph1bQ8C7N7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.99■□□□□ 0.95
Aph1bQ8C7N7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Aph1bQ8C7N7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Aph1bQ8C7N7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Aph1bQ8C7N7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Aph1bQ8C7N7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.98■□□□□ 0.95
Aph1bQ8C7N7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.98■□□□□ 0.95
Aph1bQ8C7N7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Aph1bQ8C7N7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Aph1bQ8C7N7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Aph1bQ8C7N7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Aph1bQ8C7N7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Aph1bQ8C7N7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Aph1bQ8C7N7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Aph1bQ8C7N7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.96■□□□□ 0.95
Aph1bQ8C7N7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Aph1bQ8C7N7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Aph1bQ8C7N7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Aph1bQ8C7N7 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.96■□□□□ 0.95
Aph1bQ8C7N7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Aph1bQ8C7N7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.95■□□□□ 0.94
Aph1bQ8C7N7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Aph1bQ8C7N7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.95■□□□□ 0.94
Aph1bQ8C7N7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Aph1bQ8C7N7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Aph1bQ8C7N7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Aph1bQ8C7N7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Aph1bQ8C7N7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Aph1bQ8C7N7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Aph1bQ8C7N7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Aph1bQ8C7N7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Aph1bQ8C7N7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Aph1bQ8C7N7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.93■□□□□ 0.94
Aph1bQ8C7N7 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.93■□□□□ 0.94
Aph1bQ8C7N7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.93■□□□□ 0.94
Aph1bQ8C7N7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Aph1bQ8C7N7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Aph1bQ8C7N7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Aph1bQ8C7N7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.93■□□□□ 0.94
Aph1bQ8C7N7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Aph1bQ8C7N7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
Aph1bQ8C7N7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Aph1bQ8C7N7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Aph1bQ8C7N7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Aph1bQ8C7N7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.92■□□□□ 0.94
Aph1bQ8C7N7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Aph1bQ8C7N7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Aph1bQ8C7N7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Aph1bQ8C7N7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Aph1bQ8C7N7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Aph1bQ8C7N7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Aph1bQ8C7N7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Aph1bQ8C7N7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.91■□□□□ 0.94
Aph1bQ8C7N7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Aph1bQ8C7N7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Aph1bQ8C7N7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Aph1bQ8C7N7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Aph1bQ8C7N7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Aph1bQ8C7N7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.9■□□□□ 0.94
Aph1bQ8C7N7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Aph1bQ8C7N7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Aph1bQ8C7N7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms