Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Smim4Q8C1Q6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smim4Q8C1Q6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smim4Q8C1Q6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smim4Q8C1Q6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Smim4Q8C1Q6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smim4Q8C1Q6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smim4Q8C1Q6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smim4Q8C1Q6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smim4Q8C1Q6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smim4Q8C1Q6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.69■□□□□ 0.42
Smim4Q8C1Q6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Smim4Q8C1Q6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smim4Q8C1Q6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smim4Q8C1Q6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smim4Q8C1Q6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smim4Q8C1Q6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smim4Q8C1Q6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.67■□□□□ 0.42
Smim4Q8C1Q6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smim4Q8C1Q6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smim4Q8C1Q6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Smim4Q8C1Q6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smim4Q8C1Q6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smim4Q8C1Q6 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smim4Q8C1Q6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smim4Q8C1Q6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smim4Q8C1Q6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
Smim4Q8C1Q6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smim4Q8C1Q6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Smim4Q8C1Q6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smim4Q8C1Q6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Smim4Q8C1Q6 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smim4Q8C1Q6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.66■□□□□ 0.42
Smim4Q8C1Q6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.66■□□□□ 0.42
Smim4Q8C1Q6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smim4Q8C1Q6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smim4Q8C1Q6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smim4Q8C1Q6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smim4Q8C1Q6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Smim4Q8C1Q6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smim4Q8C1Q6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smim4Q8C1Q6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smim4Q8C1Q6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smim4Q8C1Q6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smim4Q8C1Q6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smim4Q8C1Q6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smim4Q8C1Q6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smim4Q8C1Q6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smim4Q8C1Q6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.64■□□□□ 0.41
Smim4Q8C1Q6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smim4Q8C1Q6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Smim4Q8C1Q6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smim4Q8C1Q6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smim4Q8C1Q6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Smim4Q8C1Q6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smim4Q8C1Q6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smim4Q8C1Q6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.62■□□□□ 0.41
Smim4Q8C1Q6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smim4Q8C1Q6 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smim4Q8C1Q6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.62■□□□□ 0.41
Smim4Q8C1Q6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smim4Q8C1Q6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smim4Q8C1Q6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smim4Q8C1Q6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smim4Q8C1Q6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Smim4Q8C1Q6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smim4Q8C1Q6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Smim4Q8C1Q6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smim4Q8C1Q6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smim4Q8C1Q6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.61■□□□□ 0.41
Smim4Q8C1Q6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smim4Q8C1Q6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smim4Q8C1Q6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Smim4Q8C1Q6 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smim4Q8C1Q6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smim4Q8C1Q6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smim4Q8C1Q6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Smim4Q8C1Q6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smim4Q8C1Q6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smim4Q8C1Q6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smim4Q8C1Q6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smim4Q8C1Q6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Smim4Q8C1Q6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smim4Q8C1Q6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smim4Q8C1Q6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smim4Q8C1Q6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smim4Q8C1Q6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.58■□□□□ 0.4
Smim4Q8C1Q6 Gm14523-201ENSMUST00000117260 558 ntBASIC17.58■□□□□ 0.4
Smim4Q8C1Q6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Smim4Q8C1Q6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smim4Q8C1Q6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smim4Q8C1Q6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smim4Q8C1Q6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smim4Q8C1Q6 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.57■□□□□ 0.4
Smim4Q8C1Q6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smim4Q8C1Q6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smim4Q8C1Q6 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.57■□□□□ 0.4
Smim4Q8C1Q6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smim4Q8C1Q6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smim4Q8C1Q6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms