Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Usp47Q8BY87 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Usp47Q8BY87 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Usp47Q8BY87 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Usp47Q8BY87 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Usp47Q8BY87 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
Usp47Q8BY87 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC30.34■■■□□ 2.45
Usp47Q8BY87 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC30.34■■■□□ 2.45
Usp47Q8BY87 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Usp47Q8BY87 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC30.33■■■□□ 2.45
Usp47Q8BY87 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC30.33■■■□□ 2.45
Usp47Q8BY87 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
Usp47Q8BY87 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Usp47Q8BY87 Gm10620-201ENSMUST00000098379 1332 ntBASIC30.33■■■□□ 2.45
Usp47Q8BY87 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Usp47Q8BY87 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
Usp47Q8BY87 Gm15039-201ENSMUST00000118914 875 ntBASIC30.32■■■□□ 2.44
Usp47Q8BY87 AC116713.1-201ENSMUST00000215074 430 ntBASIC30.32■■■□□ 2.44
Usp47Q8BY87 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Usp47Q8BY87 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Usp47Q8BY87 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
Usp47Q8BY87 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Usp47Q8BY87 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
Usp47Q8BY87 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
Usp47Q8BY87 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Usp47Q8BY87 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Usp47Q8BY87 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Usp47Q8BY87 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Usp47Q8BY87 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
Usp47Q8BY87 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Usp47Q8BY87 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
Usp47Q8BY87 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Usp47Q8BY87 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC30.28■■■□□ 2.44
Usp47Q8BY87 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC30.28■■■□□ 2.44
Usp47Q8BY87 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC30.28■■■□□ 2.44
Usp47Q8BY87 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Usp47Q8BY87 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC30.28■■■□□ 2.44
Usp47Q8BY87 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC30.28■■■□□ 2.44
Usp47Q8BY87 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Usp47Q8BY87 Gm7417-201ENSMUST00000192950 473 ntBASIC30.28■■■□□ 2.44
Usp47Q8BY87 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
Usp47Q8BY87 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Usp47Q8BY87 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
Usp47Q8BY87 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Usp47Q8BY87 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Usp47Q8BY87 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Usp47Q8BY87 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Usp47Q8BY87 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Usp47Q8BY87 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Usp47Q8BY87 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Usp47Q8BY87 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
Usp47Q8BY87 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Usp47Q8BY87 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Usp47Q8BY87 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
Usp47Q8BY87 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Usp47Q8BY87 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Usp47Q8BY87 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Usp47Q8BY87 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC30.23■■■□□ 2.43
Usp47Q8BY87 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC30.23■■■□□ 2.43
Usp47Q8BY87 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC30.23■■■□□ 2.43
Usp47Q8BY87 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC30.23■■■□□ 2.43
Usp47Q8BY87 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC30.23■■■□□ 2.43
Usp47Q8BY87 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Usp47Q8BY87 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
Usp47Q8BY87 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Usp47Q8BY87 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Usp47Q8BY87 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC30.21■■■□□ 2.43
Usp47Q8BY87 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC30.21■■■□□ 2.43
Usp47Q8BY87 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Usp47Q8BY87 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC30.2■■■□□ 2.43
Usp47Q8BY87 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC30.2■■■□□ 2.43
Usp47Q8BY87 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC30.2■■■□□ 2.43
Usp47Q8BY87 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
Usp47Q8BY87 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC30.2■■■□□ 2.42
Usp47Q8BY87 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Usp47Q8BY87 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
Usp47Q8BY87 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC30.19■■■□□ 2.42
Usp47Q8BY87 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Usp47Q8BY87 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC30.19■■■□□ 2.42
Usp47Q8BY87 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC30.19■■■□□ 2.42
Usp47Q8BY87 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Usp47Q8BY87 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Usp47Q8BY87 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Usp47Q8BY87 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Usp47Q8BY87 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Usp47Q8BY87 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
Usp47Q8BY87 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC30.17■■■□□ 2.42
Usp47Q8BY87 Gm22238-201ENSMUST00000175222 88 ntBASIC30.17■■■□□ 2.42
Usp47Q8BY87 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Usp47Q8BY87 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Usp47Q8BY87 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Usp47Q8BY87 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Usp47Q8BY87 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Usp47Q8BY87 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC30.16■■■□□ 2.42
Usp47Q8BY87 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC30.16■■■□□ 2.42
Usp47Q8BY87 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Usp47Q8BY87 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
Usp47Q8BY87 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Usp47Q8BY87 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Usp47Q8BY87 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms