Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cpsf4Q8BQZ5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.46■□□□□ 0.87
Cpsf4Q8BQZ5 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cpsf4Q8BQZ5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.46■□□□□ 0.87
Cpsf4Q8BQZ5 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cpsf4Q8BQZ5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cpsf4Q8BQZ5 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Cpsf4Q8BQZ5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.45■□□□□ 0.86
Cpsf4Q8BQZ5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf4Q8BQZ5 Gm13238-201ENSMUST00000117655 780 ntBASIC20.45■□□□□ 0.86
Cpsf4Q8BQZ5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf4Q8BQZ5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf4Q8BQZ5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf4Q8BQZ5 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.44■□□□□ 0.86
Cpsf4Q8BQZ5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf4Q8BQZ5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf4Q8BQZ5 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf4Q8BQZ5 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf4Q8BQZ5 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Cpsf4Q8BQZ5 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.44■□□□□ 0.86
Cpsf4Q8BQZ5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Cpsf4Q8BQZ5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf4Q8BQZ5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf4Q8BQZ5 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf4Q8BQZ5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf4Q8BQZ5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf4Q8BQZ5 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.43■□□□□ 0.86
Cpsf4Q8BQZ5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.42■□□□□ 0.86
Cpsf4Q8BQZ5 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf4Q8BQZ5 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.42■□□□□ 0.86
Cpsf4Q8BQZ5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf4Q8BQZ5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf4Q8BQZ5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf4Q8BQZ5 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
Cpsf4Q8BQZ5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.41■□□□□ 0.86
Cpsf4Q8BQZ5 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf4Q8BQZ5 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.41■□□□□ 0.86
Cpsf4Q8BQZ5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Cpsf4Q8BQZ5 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cpsf4Q8BQZ5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cpsf4Q8BQZ5 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf4Q8BQZ5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf4Q8BQZ5 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf4Q8BQZ5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf4Q8BQZ5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Cpsf4Q8BQZ5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Cpsf4Q8BQZ5 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cpsf4Q8BQZ5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Cpsf4Q8BQZ5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf4Q8BQZ5 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf4Q8BQZ5 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cpsf4Q8BQZ5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cpsf4Q8BQZ5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Cpsf4Q8BQZ5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf4Q8BQZ5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cpsf4Q8BQZ5 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf4Q8BQZ5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf4Q8BQZ5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.38■□□□□ 0.85
Cpsf4Q8BQZ5 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf4Q8BQZ5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cpsf4Q8BQZ5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cpsf4Q8BQZ5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.38■□□□□ 0.85
Cpsf4Q8BQZ5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cpsf4Q8BQZ5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cpsf4Q8BQZ5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf4Q8BQZ5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf4Q8BQZ5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf4Q8BQZ5 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf4Q8BQZ5 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf4Q8BQZ5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf4Q8BQZ5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.37■□□□□ 0.85
Cpsf4Q8BQZ5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf4Q8BQZ5 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Cpsf4Q8BQZ5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Cpsf4Q8BQZ5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.37■□□□□ 0.85
Cpsf4Q8BQZ5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Cpsf4Q8BQZ5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf4Q8BQZ5 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf4Q8BQZ5 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf4Q8BQZ5 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Cpsf4Q8BQZ5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Cpsf4Q8BQZ5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf4Q8BQZ5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.36■□□□□ 0.85
Cpsf4Q8BQZ5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.36■□□□□ 0.85
Cpsf4Q8BQZ5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf4Q8BQZ5 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf4Q8BQZ5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf4Q8BQZ5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf4Q8BQZ5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf4Q8BQZ5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.35■□□□□ 0.85
Cpsf4Q8BQZ5 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.35■□□□□ 0.85
Cpsf4Q8BQZ5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cpsf4Q8BQZ5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.35■□□□□ 0.85
Cpsf4Q8BQZ5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.35■□□□□ 0.85
Cpsf4Q8BQZ5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Cpsf4Q8BQZ5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf4Q8BQZ5 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf4Q8BQZ5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf4Q8BQZ5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf4Q8BQZ5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 451 ms