Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdhr3Q8BL00 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cdhr3Q8BL00 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdhr3Q8BL00 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.46■□□□□ 0.55
Cdhr3Q8BL00 Gm11687-201ENSMUST00000118911 886 ntBASIC18.46■□□□□ 0.55
Cdhr3Q8BL00 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdhr3Q8BL00 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdhr3Q8BL00 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
Cdhr3Q8BL00 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Cdhr3Q8BL00 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cdhr3Q8BL00 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdhr3Q8BL00 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdhr3Q8BL00 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdhr3Q8BL00 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdhr3Q8BL00 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdhr3Q8BL00 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cdhr3Q8BL00 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdhr3Q8BL00 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdhr3Q8BL00 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdhr3Q8BL00 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdhr3Q8BL00 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
Cdhr3Q8BL00 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdhr3Q8BL00 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdhr3Q8BL00 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.44■□□□□ 0.54
Cdhr3Q8BL00 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdhr3Q8BL00 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdhr3Q8BL00 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdhr3Q8BL00 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdhr3Q8BL00 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdhr3Q8BL00 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdhr3Q8BL00 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdhr3Q8BL00 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdhr3Q8BL00 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdhr3Q8BL00 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdhr3Q8BL00 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdhr3Q8BL00 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdhr3Q8BL00 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdhr3Q8BL00 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdhr3Q8BL00 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdhr3Q8BL00 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdhr3Q8BL00 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdhr3Q8BL00 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdhr3Q8BL00 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.42■□□□□ 0.54
Cdhr3Q8BL00 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdhr3Q8BL00 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdhr3Q8BL00 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Cdhr3Q8BL00 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.41■□□□□ 0.54
Cdhr3Q8BL00 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdhr3Q8BL00 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.41■□□□□ 0.54
Cdhr3Q8BL00 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cdhr3Q8BL00 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdhr3Q8BL00 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdhr3Q8BL00 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.41■□□□□ 0.54
Cdhr3Q8BL00 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdhr3Q8BL00 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdhr3Q8BL00 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdhr3Q8BL00 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdhr3Q8BL00 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdhr3Q8BL00 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdhr3Q8BL00 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdhr3Q8BL00 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdhr3Q8BL00 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdhr3Q8BL00 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdhr3Q8BL00 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdhr3Q8BL00 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdhr3Q8BL00 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdhr3Q8BL00 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdhr3Q8BL00 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdhr3Q8BL00 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdhr3Q8BL00 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdhr3Q8BL00 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdhr3Q8BL00 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.39■□□□□ 0.53
Cdhr3Q8BL00 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdhr3Q8BL00 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdhr3Q8BL00 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
Cdhr3Q8BL00 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cdhr3Q8BL00 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdhr3Q8BL00 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdhr3Q8BL00 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.38■□□□□ 0.53
Cdhr3Q8BL00 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdhr3Q8BL00 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdhr3Q8BL00 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.37■□□□□ 0.53
Cdhr3Q8BL00 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdhr3Q8BL00 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cdhr3Q8BL00 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdhr3Q8BL00 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdhr3Q8BL00 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Cdhr3Q8BL00 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.37■□□□□ 0.53
Cdhr3Q8BL00 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdhr3Q8BL00 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdhr3Q8BL00 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdhr3Q8BL00 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdhr3Q8BL00 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdhr3Q8BL00 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.36■□□□□ 0.53
Cdhr3Q8BL00 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.36■□□□□ 0.53
Cdhr3Q8BL00 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdhr3Q8BL00 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdhr3Q8BL00 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdhr3Q8BL00 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdhr3Q8BL00 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms