Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
Nop53Q8BK35 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nop53Q8BK35 Gm37415-201ENSMUST00000192265 2054 ntBASIC22.59■■□□□ 1.21
Nop53Q8BK35 Gm14523-201ENSMUST00000117260 558 ntBASIC22.59■■□□□ 1.21
Nop53Q8BK35 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nop53Q8BK35 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nop53Q8BK35 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nop53Q8BK35 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nop53Q8BK35 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nop53Q8BK35 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.58■■□□□ 1.21
Nop53Q8BK35 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Nop53Q8BK35 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Nop53Q8BK35 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.2
Nop53Q8BK35 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Nop53Q8BK35 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
Nop53Q8BK35 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Nop53Q8BK35 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Nop53Q8BK35 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.57■■□□□ 1.2
Nop53Q8BK35 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nop53Q8BK35 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nop53Q8BK35 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nop53Q8BK35 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nop53Q8BK35 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC22.57■■□□□ 1.2
Nop53Q8BK35 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Nop53Q8BK35 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Nop53Q8BK35 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Nop53Q8BK35 Gm7332-201ENSMUST00000118351 454 ntBASIC22.56■■□□□ 1.2
Nop53Q8BK35 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC22.56■■□□□ 1.2
Nop53Q8BK35 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC22.56■■□□□ 1.2
Nop53Q8BK35 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.55■■□□□ 1.2
Nop53Q8BK35 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nop53Q8BK35 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nop53Q8BK35 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.55■■□□□ 1.2
Nop53Q8BK35 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.55■■□□□ 1.2
Nop53Q8BK35 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nop53Q8BK35 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nop53Q8BK35 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC22.55■■□□□ 1.2
Nop53Q8BK35 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Nop53Q8BK35 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Nop53Q8BK35 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.54■■□□□ 1.2
Nop53Q8BK35 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Nop53Q8BK35 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Nop53Q8BK35 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Nop53Q8BK35 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Nop53Q8BK35 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Nop53Q8BK35 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Nop53Q8BK35 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.52■■□□□ 1.2
Nop53Q8BK35 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.52■■□□□ 1.2
Nop53Q8BK35 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
Nop53Q8BK35 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nop53Q8BK35 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nop53Q8BK35 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nop53Q8BK35 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Nop53Q8BK35 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nop53Q8BK35 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Nop53Q8BK35 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Nop53Q8BK35 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Nop53Q8BK35 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Nop53Q8BK35 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Nop53Q8BK35 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.5■■□□□ 1.19
Nop53Q8BK35 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Nop53Q8BK35 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.49■■□□□ 1.19
Nop53Q8BK35 Gm12504-201ENSMUST00000120860 2231 ntBASIC22.49■■□□□ 1.19
Nop53Q8BK35 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.49■■□□□ 1.19
Nop53Q8BK35 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.49■■□□□ 1.19
Nop53Q8BK35 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Nop53Q8BK35 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nop53Q8BK35 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Nop53Q8BK35 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nop53Q8BK35 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Nop53Q8BK35 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nop53Q8BK35 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nop53Q8BK35 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nop53Q8BK35 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nop53Q8BK35 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nop53Q8BK35 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Nop53Q8BK35 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Nop53Q8BK35 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nop53Q8BK35 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nop53Q8BK35 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Nop53Q8BK35 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nop53Q8BK35 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nop53Q8BK35 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Nop53Q8BK35 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Nop53Q8BK35 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Nop53Q8BK35 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC22.47■■□□□ 1.19
Nop53Q8BK35 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Nop53Q8BK35 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Nop53Q8BK35 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Nop53Q8BK35 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Nop53Q8BK35 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Nop53Q8BK35 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Nop53Q8BK35 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Nop53Q8BK35 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Nop53Q8BK35 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Nop53Q8BK35 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.46■■□□□ 1.19
Nop53Q8BK35 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Nop53Q8BK35 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Nop53Q8BK35 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Nop53Q8BK35 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms