Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
Tdp1Q8BJ37 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Tdp1Q8BJ37 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Tdp1Q8BJ37 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Tdp1Q8BJ37 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.63■■□□□ 1.37
Tdp1Q8BJ37 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC23.62■■□□□ 1.37
Tdp1Q8BJ37 Gm45417-201ENSMUST00000209533 758 ntBASIC23.62■■□□□ 1.37
Tdp1Q8BJ37 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Tdp1Q8BJ37 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Tdp1Q8BJ37 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Tdp1Q8BJ37 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Tdp1Q8BJ37 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Tdp1Q8BJ37 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC23.61■■□□□ 1.37
Tdp1Q8BJ37 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Tdp1Q8BJ37 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Tdp1Q8BJ37 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Tdp1Q8BJ37 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Tdp1Q8BJ37 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Tdp1Q8BJ37 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Tdp1Q8BJ37 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Tdp1Q8BJ37 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC23.59■■□□□ 1.37
Tdp1Q8BJ37 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC23.59■■□□□ 1.37
Tdp1Q8BJ37 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Tdp1Q8BJ37 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Tdp1Q8BJ37 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Tdp1Q8BJ37 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Tdp1Q8BJ37 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC23.58■■□□□ 1.37
Tdp1Q8BJ37 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Tdp1Q8BJ37 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Tdp1Q8BJ37 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Tdp1Q8BJ37 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Tdp1Q8BJ37 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC23.57■■□□□ 1.36
Tdp1Q8BJ37 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Tdp1Q8BJ37 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Tdp1Q8BJ37 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Tdp1Q8BJ37 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Tdp1Q8BJ37 Serp2-204ENSMUST00000228055 705 ntBASIC23.56■■□□□ 1.36
Tdp1Q8BJ37 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Tdp1Q8BJ37 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Tdp1Q8BJ37 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Tdp1Q8BJ37 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Tdp1Q8BJ37 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC23.55■■□□□ 1.36
Tdp1Q8BJ37 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Tdp1Q8BJ37 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Tdp1Q8BJ37 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Tdp1Q8BJ37 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Tdp1Q8BJ37 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.54■■□□□ 1.36
Tdp1Q8BJ37 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.54■■□□□ 1.36
Tdp1Q8BJ37 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Tdp1Q8BJ37 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Tdp1Q8BJ37 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Tdp1Q8BJ37 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Tdp1Q8BJ37 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC23.53■■□□□ 1.36
Tdp1Q8BJ37 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Tdp1Q8BJ37 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Tdp1Q8BJ37 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Tdp1Q8BJ37 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC23.52■■□□□ 1.36
Tdp1Q8BJ37 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Tdp1Q8BJ37 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Tdp1Q8BJ37 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Tdp1Q8BJ37 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Tdp1Q8BJ37 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.51■■□□□ 1.35
Tdp1Q8BJ37 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Tdp1Q8BJ37 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Tdp1Q8BJ37 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Tdp1Q8BJ37 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Tdp1Q8BJ37 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Tdp1Q8BJ37 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Tdp1Q8BJ37 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Tdp1Q8BJ37 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Tdp1Q8BJ37 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Tdp1Q8BJ37 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Tdp1Q8BJ37 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Tdp1Q8BJ37 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Tdp1Q8BJ37 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Tdp1Q8BJ37 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Tdp1Q8BJ37 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC23.49■■□□□ 1.35
Tdp1Q8BJ37 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Tdp1Q8BJ37 AC116713.1-201ENSMUST00000215074 430 ntBASIC23.49■■□□□ 1.35
Tdp1Q8BJ37 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Tdp1Q8BJ37 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC23.48■■□□□ 1.35
Tdp1Q8BJ37 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC23.48■■□□□ 1.35
Tdp1Q8BJ37 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Tdp1Q8BJ37 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC23.48■■□□□ 1.35
Tdp1Q8BJ37 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Tdp1Q8BJ37 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Tdp1Q8BJ37 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Tdp1Q8BJ37 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
Tdp1Q8BJ37 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Tdp1Q8BJ37 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Tdp1Q8BJ37 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Tdp1Q8BJ37 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tdp1Q8BJ37 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Tdp1Q8BJ37 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC23.47■■□□□ 1.35
Tdp1Q8BJ37 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tdp1Q8BJ37 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Tdp1Q8BJ37 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tdp1Q8BJ37 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tdp1Q8BJ37 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Tdp1Q8BJ37 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 212.8 ms