Protein–RNA interactions for Protein: Q8BGR5

Fam53b, Protein FAM53B, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam53bQ8BGR5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Fam53bQ8BGR5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Fam53bQ8BGR5 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fam53bQ8BGR5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fam53bQ8BGR5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fam53bQ8BGR5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fam53bQ8BGR5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam53bQ8BGR5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Fam53bQ8BGR5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Fam53bQ8BGR5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam53bQ8BGR5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam53bQ8BGR5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fam53bQ8BGR5 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Fam53bQ8BGR5 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fam53bQ8BGR5 Gm13238-201ENSMUST00000117655 780 ntBASIC18.69■□□□□ 0.58
Fam53bQ8BGR5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.69■□□□□ 0.58
Fam53bQ8BGR5 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Fam53bQ8BGR5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.69■□□□□ 0.58
Fam53bQ8BGR5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Fam53bQ8BGR5 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.69■□□□□ 0.58
Fam53bQ8BGR5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.69■□□□□ 0.58
Fam53bQ8BGR5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fam53bQ8BGR5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.69■□□□□ 0.58
Fam53bQ8BGR5 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Fam53bQ8BGR5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Fam53bQ8BGR5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Fam53bQ8BGR5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Fam53bQ8BGR5 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Fam53bQ8BGR5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Fam53bQ8BGR5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Fam53bQ8BGR5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.67■□□□□ 0.58
Fam53bQ8BGR5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Fam53bQ8BGR5 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.67■□□□□ 0.58
Fam53bQ8BGR5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.67■□□□□ 0.58
Fam53bQ8BGR5 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Fam53bQ8BGR5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Fam53bQ8BGR5 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Fam53bQ8BGR5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.66■□□□□ 0.58
Fam53bQ8BGR5 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.66■□□□□ 0.58
Fam53bQ8BGR5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.66■□□□□ 0.58
Fam53bQ8BGR5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Fam53bQ8BGR5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fam53bQ8BGR5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fam53bQ8BGR5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fam53bQ8BGR5 Gm45444-201ENSMUST00000211394 898 ntBASIC18.65■□□□□ 0.58
Fam53bQ8BGR5 Gm5921-201ENSMUST00000075898 882 ntBASIC18.65■□□□□ 0.58
Fam53bQ8BGR5 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fam53bQ8BGR5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fam53bQ8BGR5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Fam53bQ8BGR5 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Fam53bQ8BGR5 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
Fam53bQ8BGR5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.58
Fam53bQ8BGR5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Fam53bQ8BGR5 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fam53bQ8BGR5 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fam53bQ8BGR5 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.64■□□□□ 0.57
Fam53bQ8BGR5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fam53bQ8BGR5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fam53bQ8BGR5 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Fam53bQ8BGR5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fam53bQ8BGR5 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.64■□□□□ 0.57
Fam53bQ8BGR5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fam53bQ8BGR5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fam53bQ8BGR5 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Fam53bQ8BGR5 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Fam53bQ8BGR5 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Fam53bQ8BGR5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Fam53bQ8BGR5 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Fam53bQ8BGR5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Fam53bQ8BGR5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Fam53bQ8BGR5 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam53bQ8BGR5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam53bQ8BGR5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam53bQ8BGR5 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Fam53bQ8BGR5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Fam53bQ8BGR5 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Fam53bQ8BGR5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam53bQ8BGR5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Fam53bQ8BGR5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam53bQ8BGR5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Fam53bQ8BGR5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Fam53bQ8BGR5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam53bQ8BGR5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam53bQ8BGR5 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Fam53bQ8BGR5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Fam53bQ8BGR5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam53bQ8BGR5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Fam53bQ8BGR5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Fam53bQ8BGR5 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam53bQ8BGR5 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam53bQ8BGR5 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam53bQ8BGR5 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam53bQ8BGR5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam53bQ8BGR5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam53bQ8BGR5 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam53bQ8BGR5 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam53bQ8BGR5 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam53bQ8BGR5 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.59■□□□□ 0.57
Fam53bQ8BGR5 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Fam53bQ8BGR5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms